Functional clusters
Information
- Type InterPro
- Description Proline-rich protein 1/3
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 5 | CH_aly_545 | 2 | 2 | 0.000198013 |
Brassica carinata | ChrB02 | 5 | CH_bca_2159 | 2 | 2 | 0.000961939 |
Brassica carinata | ChrC02 | 5 | CH_bca_641 | 3 | 4 | 0.000000328987 |
Brassica napus | A04 | 5 | CH_bna_1440 | 2 | 2 | 0.00066822 |
Brassica napus | C08 | 5 | CH_bna_1441 | 2 | 2 | 0.00066822 |
Brassica napus | C04 | 5 | CH_bna_401 | 3 | 3 | 0.0000000434118 |
Brassica oleracea | C4 | 5 | CH_bol_193 | 3 | 3 | 0.000000016026 |
Arabidopsis lyrata | scaffold_1 | 6 | CH_aly_545 | 2 | 2 | 0.000198013 |
Brassica carinata | ChrB02 | 6 | CH_bca_2159 | 2 | 2 | 0.000961939 |
Brassica carinata | ChrC02 | 6 | CH_bca_641 | 3 | 4 | 0.000000328987 |
Brassica napus | A04 | 6 | CH_bna_1440 | 2 | 2 | 0.00066822 |
Brassica napus | C08 | 6 | CH_bna_1441 | 2 | 2 | 0.00066822 |
Brassica napus | C04 | 6 | CH_bna_401 | 3 | 3 | 0.0000000434118 |
Brassica oleracea | C4 | 6 | CH_bol_193 | 3 | 3 | 0.000000016026 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |