Functional clusters

Information

  • Type InterPro
  • Description Protein BIC

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Lonicera japonica GWHAAZE00000002 5 CH_lonja_951 2 2 0.000179662
Physcomitrium patens Chr03 5 CH_ppa_271 2 2 0.000183818
Populus trichocarpa Chr04 5 CH_ptr_698 2 2 0.000346801
Populus trichocarpa Chr09 5 CH_ptr_699 2 2 0.000346801
Solanum lycopersicum SL4.0ch11 5 CH_sly_742 2 2 0.000176082
Solanum pennellii Spenn-ch11 5 CH_spe_665 2 2 0.000133437
Solanum tuberosum ST4.03ch11 5 CH_stu_727 2 2 0.000153736
Lonicera japonica GWHAAZE00000002 6 CH_lonja_951 2 2 0.000179662
Physcomitrium patens Chr03 6 CH_ppa_271 2 2 0.000183818
Populus trichocarpa Chr04 6 CH_ptr_698 2 2 0.000346801
Populus trichocarpa Chr09 6 CH_ptr_699 2 2 0.000346801
Solanum lycopersicum SL4.0ch11 6 CH_sly_742 2 2 0.000176082
Solanum pennellii Spenn-ch11 6 CH_spe_665 2 2 0.000133437
Solanum tuberosum ST4.03ch11 6 CH_stu_727 2 2 0.000153736

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001