Functional clusters
Information
- Type InterPro
- Description Uncharacterized protein At4g22758-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_675 | 3 | 3 | 0.00000272122 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 5 | CH_arhy_772 | 3 | 4 | 0.0000108821 |
| Amborella trichopoda | AmTr_v1.0_scaffold00130 | 5 | CH_atr_608 | 3 | 23 | 0.000584926 |
| Corylus avellana | 5 | 5 | CH_cav_364 | 3 | 7 | 0.00000616928 |
| Coffea canephora | chr8 | 5 | CH_ccan_560 | 2 | 4 | 0.000255531 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_782 | 2 | 2 | 0.000820311 |
| Carpinus fangiana | Cfa05 | 5 | CH_cfa_616 | 2 | 2 | 0.000757346 |
| Carya illinoinensis | Chr12 | 5 | CH_cil_377 | 3 | 3 | 0.000000484091 |
| Carica papaya | supercontig_29 | 5 | CH_cpa_678 | 2 | 2 | 0.000950661 |
| Fragaria vesca | Fvb5 | 5 | CH_fve_795 | 2 | 2 | 0.000589102 |
| Helianthus annuus | HanXRQChr17 | 5 | CH_han_542 | 3 | 3 | 0.00000101918 |
| Hydrangea macrophylla | Hma1.2p1_0138F.1 | 5 | CH_hma_589 | 2 | 2 | 0.000333259 |
| Lupinus albus | Lalb_Chr13 | 5 | CH_lal_274 | 3 | 3 | 0.00000150394 |
| Nelumbo nucifera | chr3 | 5 | CH_nnu_288 | 3 | 5 | 0.00000417519 |
| Petunia axillaris | Peaxi162Scf00271 | 5 | CH_pax_329 | 3 | 5 | 0.00000890625 |
| Prunus persica | Pp05 | 5 | CH_ppe_856 | 2 | 2 | 0.000745962 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_1021 | 3 | 37 | 0.000206737 |
| Quercus lobata | CM012294 | 5 | CH_qlo_716 | 4 | 12 | 0.0000000257253 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1325 | 3 | 3 | 0.00000161972 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_270 | 6 | 6 | 3.09038e-17 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_675 | 3 | 3 | 0.00000272122 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 6 | CH_arhy_772 | 3 | 4 | 0.0000108821 |
| Amborella trichopoda | AmTr_v1.0_scaffold00130 | 6 | CH_atr_608 | 3 | 23 | 0.000584926 |
| Corylus avellana | 5 | 6 | CH_cav_364 | 3 | 7 | 0.00000616928 |
| Coffea canephora | chr8 | 6 | CH_ccan_560 | 2 | 4 | 0.000255531 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_782 | 2 | 2 | 0.000820311 |
| Carpinus fangiana | Cfa05 | 6 | CH_cfa_616 | 2 | 2 | 0.000757346 |
| Carya illinoinensis | Chr12 | 6 | CH_cil_377 | 3 | 3 | 0.000000484091 |
| Carica papaya | supercontig_29 | 6 | CH_cpa_678 | 2 | 2 | 0.000950661 |
| Fragaria vesca | Fvb5 | 6 | CH_fve_795 | 2 | 2 | 0.000589102 |
| Helianthus annuus | HanXRQChr17 | 6 | CH_han_542 | 3 | 3 | 0.00000101918 |
| Hydrangea macrophylla | Hma1.2p1_0138F.1 | 6 | CH_hma_589 | 2 | 2 | 0.000333259 |
| Lupinus albus | Lalb_Chr13 | 6 | CH_lal_274 | 3 | 3 | 0.00000150394 |
| Nelumbo nucifera | chr3 | 6 | CH_nnu_288 | 3 | 5 | 0.00000417519 |
| Petunia axillaris | Peaxi162Scf00271 | 6 | CH_pax_329 | 3 | 5 | 0.00000890625 |
| Prunus persica | Pp05 | 6 | CH_ppe_856 | 2 | 2 | 0.000745962 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_1021 | 3 | 37 | 0.000206737 |
| Quercus lobata | CM012294 | 6 | CH_qlo_716 | 4 | 12 | 0.0000000257253 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1325 | 3 | 3 | 0.00000161972 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_270 | 6 | 6 | 3.09038e-17 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |