Functional clusters
Information
- Type InterPro
- Description Protein POLAR-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Capsicum annuum | PGAv.1.6.scaffold1228 | 5 | CH_can_831 | 2 | 3 | 0.000743443 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_1085 | 2 | 2 | 0.000386429 |
| Magnolia biondii | Chr16 | 5 | CH_mbi_1048 | 2 | 3 | 0.000291397 |
| Manihot esculenta | Chromosome08 | 5 | CH_mes_63 | 10 | 35 | 5.3775e-21 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_624 | 2 | 2 | 0.000750356 |
| Vigna mungo | CM024071.1 | 5 | CH_vmu_651 | 2 | 2 | 0.000969211 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_652 | 2 | 2 | 0.000969211 |
| Capsicum annuum | PGAv.1.6.scaffold1228 | 6 | CH_can_831 | 2 | 3 | 0.000743443 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_1085 | 2 | 2 | 0.000386429 |
| Magnolia biondii | Chr16 | 6 | CH_mbi_1048 | 2 | 3 | 0.000291397 |
| Manihot esculenta | Chromosome08 | 6 | CH_mes_63 | 10 | 35 | 5.3775e-21 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_624 | 2 | 2 | 0.000750356 |
| Vigna mungo | CM024071.1 | 6 | CH_vmu_651 | 2 | 2 | 0.000969211 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_652 | 2 | 2 | 0.000969211 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |