Functional clusters

Information

  • Type InterPro
  • Description GEX1/Brambleberry

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrullus lanatus CG_Chr05 5 CH_cla_304 2 2 0.000266134
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_294 3 5 0.000000302
Glycine max Gm17 5 CH_gma_832 2 2 0.000379557
Helianthus annuus HanXRQChr03 5 CH_han_1006 2 2 0.000231857
Magnolia biondii Chr13 5 CH_mbi_779 2 2 0.0000485661
Medicago truncatula chr2 5 CH_mtr_833 3 12 0.0000111349
Papaver somniferum NW_020621936.1 5 CH_pso_1042 2 2 0.000225294
Salix brachista GWHAAZH00000017 5 CH_sbr_572 3 31 0.000267147
Salix brachista GWHAAZH00000010 5 CH_sbr_675 2 2 0.00063014
Selenicereus undatus Scaffold_33676 5 CH_sun_210 2 2 0.0000726639
Trochodendron aralioides group0 5 CH_tar_853 2 3 0.000540303
Theobroma cacao Chromosome_4 5 CH_tca_588 2 3 0.000219708
Tarenaya hassleriana NW_010961290.1 5 CH_tha_151 3 15 0.00000332837
Vigna mungo CM024078.1 5 CH_vmu_494 3 45 0.000354626
Citrullus lanatus CG_Chr05 6 CH_cla_304 2 2 0.000266134
Cucumis melo chr06 6 CH_cme_387 2 2 0.000200133
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_294 3 5 0.000000302
Glycine max Gm17 6 CH_gma_832 2 2 0.000379557
Helianthus annuus HanXRQChr03 6 CH_han_1006 2 2 0.000231857
Magnolia biondii Chr13 6 CH_mbi_779 2 2 0.0000485661
Medicago truncatula chr2 6 CH_mtr_833 3 12 0.0000111349
Papaver somniferum NW_020621936.1 6 CH_pso_1042 2 2 0.000225294
Salix brachista GWHAAZH00000017 6 CH_sbr_572 3 31 0.000267147
Salix brachista GWHAAZH00000010 6 CH_sbr_675 2 2 0.00063014
Selenicereus undatus Scaffold_33676 6 CH_sun_210 2 2 0.0000726639
Trochodendron aralioides group0 6 CH_tar_853 2 3 0.000540303
Theobroma cacao Chromosome_4 6 CH_tca_588 2 3 0.000219708
Tarenaya hassleriana NW_010961290.1 6 CH_tha_151 3 15 0.00000332837
Vigna mungo CM024078.1 6 CH_vmu_494 3 45 0.000354626

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001