Functional clusters
Information
- Type InterPro
- Description Putative F-box protein At1g67623-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr11 | 5 | CH_acertr_949 | 3 | 38 | 0.000626966 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1491 | 7 | 68 | 0.000174784 |
| Brassica napus | C02 | 5 | CH_bna_1009 | 4 | 5 | 0.0000601669 |
| Brassica napus | A05 | 5 | CH_bna_1037 | 5 | 14 | 0.0000761413 |
| Brassica napus | C07 | 5 | CH_bna_1464 | 5 | 21 | 0.000759465 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 5 | CH_bvu_532 | 2 | 2 | 0.000827917 |
| Carya illinoinensis | Chr05 | 5 | CH_cil_288 | 3 | 3 | 0.0000000230519 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_439 | 2 | 2 | 0.0000637775 |
| Davidia involucrata | GWHABJS00000004 | 5 | CH_din_715 | 2 | 3 | 0.000450094 |
| Durio zibethinus | NW_019168159.1 | 5 | CH_dzi_195 | 3 | 5 | 0.000000128886 |
| Eucalyptus grandis | Chr07 | 5 | CH_egr_868 | 3 | 6 | 0.00000205475 |
| Gossypium hirsutum | D09 | 5 | CH_ghi_1355 | 2 | 2 | 0.000961256 |
| Glycine max | Gm07 | 5 | CH_gma_831 | 2 | 2 | 0.000379557 |
| Gossypium raimondii | Chr06 | 5 | CH_gra_636 | 2 | 2 | 0.000536107 |
| Lotus japonicus | chr5 | 5 | CH_lja_336 | 3 | 3 | 0.0000155247 |
| Lotus japonicus | chr4 | 5 | CH_lja_35 | 7 | 12 | 0.00000000000000287939 |
| Malus domestica | Chr16 | 5 | CH_mdo_1378 | 2 | 7 | 0.000796269 |
| Phaseolus vulgaris | Chr03 | 5 | CH_pvu_626 | 2 | 2 | 0.000440836 |
| Rhododendron simsii | chr12 | 5 | CH_rsi_899 | 2 | 2 | 0.000387184 |
| Trochodendron aralioides | group0 | 5 | CH_tar_346 | 3 | 8 | 0.0000012108 |
| Theobroma cacao | Chromosome_3 | 5 | CH_tca_694 | 2 | 2 | 0.000439432 |
| Tripterygium wilfordii | NC_052245.1 | 5 | CH_twi_426 | 3 | 65 | 0.000203299 |
| Acer truncatum | chr11 | 6 | CH_acertr_949 | 3 | 38 | 0.000626966 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1491 | 7 | 68 | 0.000174784 |
| Brassica napus | C02 | 6 | CH_bna_1009 | 4 | 5 | 0.0000601669 |
| Brassica napus | A05 | 6 | CH_bna_1037 | 5 | 14 | 0.0000761413 |
| Brassica napus | C07 | 6 | CH_bna_1464 | 5 | 21 | 0.000759465 |
| Beta vulgaris | Chr8_EL10_PGA_scaffold4 | 6 | CH_bvu_532 | 2 | 2 | 0.000827917 |
| Carya illinoinensis | Chr05 | 6 | CH_cil_288 | 3 | 3 | 0.0000000230519 |
| Cucumis melo | chr10 | 6 | CH_cme_450 | 2 | 3 | 0.000600367 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_439 | 2 | 2 | 0.0000637775 |
| Davidia involucrata | GWHABJS00000004 | 6 | CH_din_715 | 2 | 3 | 0.000450094 |
| Durio zibethinus | NW_019168159.1 | 6 | CH_dzi_195 | 3 | 5 | 0.000000128886 |
| Eucalyptus grandis | Chr07 | 6 | CH_egr_868 | 3 | 6 | 0.00000205475 |
| Fragaria x ananassa | Fvb1-1 | 6 | CH_fan_1184 | 2 | 2 | 0.00066613 |
| Gossypium hirsutum | D09 | 6 | CH_ghi_1355 | 2 | 2 | 0.000961256 |
| Glycine max | Gm07 | 6 | CH_gma_831 | 2 | 2 | 0.000379557 |
| Gossypium raimondii | Chr06 | 6 | CH_gra_636 | 2 | 2 | 0.000536107 |
| Lotus japonicus | chr5 | 6 | CH_lja_336 | 3 | 3 | 0.0000155247 |
| Lotus japonicus | chr4 | 6 | CH_lja_35 | 7 | 12 | 0.00000000000000287939 |
| Malus domestica | Chr16 | 6 | CH_mdo_1378 | 2 | 7 | 0.000796269 |
| Phaseolus vulgaris | Chr03 | 6 | CH_pvu_626 | 2 | 2 | 0.000440836 |
| Rhododendron simsii | chr12 | 6 | CH_rsi_899 | 2 | 2 | 0.000387184 |
| Trochodendron aralioides | group0 | 6 | CH_tar_346 | 3 | 8 | 0.0000012108 |
| Theobroma cacao | Chromosome_3 | 6 | CH_tca_694 | 2 | 2 | 0.000439432 |
| Tripterygium wilfordii | NC_052245.1 | 6 | CH_twi_426 | 3 | 65 | 0.000203299 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |