Functional clusters

Information

  • Type InterPro
  • Description Coiled-coil domain-containing protein SCD2-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group1 5 CH_ach_631 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 5 CH_amhyb_478 2 2 0.000841751
Brassica oleracea C9 5 CH_bol_858 2 2 0.000686409
Coffea canephora chr11 5 CH_ccan_446 2 6 0.00007666
Carica papaya supercontig_4 5 CH_cpa_593 2 2 0.000570396
Durio zibethinus NW_019168004.1 5 CH_dzi_91 5 22 0.0000000000191231
Eucalyptus grandis Chr08 5 CH_egr_1364 2 2 0.000585274
Helianthus annuus HanXRQChr08 5 CH_han_1137 2 2 0.000579643
Lupinus albus Lalb_Chr18 5 CH_lal_210 3 3 0.000000231376
Magnolia biondii Chr11 5 CH_mbi_317 3 4 0.000000014152
Nelumbo nucifera chr3 5 CH_nnu_464 2 2 0.000144505
Olea europaea chr21 5 CH_oeu_116 3 3 0.0000000170963
Physcomitrium patens Chr19 5 CH_ppa_351 3 40 0.000554834
Phaseolus vulgaris Chr06 5 CH_pvu_625 2 2 0.000440836
Salix brachista GWHAAZH00000001 5 CH_sbr_711 2 2 0.000945209
Sequoiadendron giganteum chr2 5 CH_sgi_1996 2 3 0.000146142
Sapria himalayana scaffold21_10161493 5 CH_shi_408 2 3 0.000171536
Solanum lycopersicum SL4.0ch10 5 CH_sly_827 2 2 0.000352164
Solanum tuberosum ST4.03ch10 5 CH_stu_619 2 2 0.0000512453
Vanilla planifolia CM028153.1 5 CH_vpl_636 2 2 0.000443328
Vitis vinifera chr14 5 CH_vvi_317 3 4 0.000000347115
Actinidia chinensis Lachesis_group1 6 CH_ach_631 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 6 CH_amhyb_478 2 2 0.000841751
Brassica oleracea C9 6 CH_bol_858 2 2 0.000686409
Coffea canephora chr11 6 CH_ccan_446 2 6 0.00007666
Carica papaya supercontig_4 6 CH_cpa_593 2 2 0.000570396
Durio zibethinus NW_019168004.1 6 CH_dzi_91 5 22 0.0000000000191231
Eucalyptus grandis Chr08 6 CH_egr_1364 2 2 0.000585274
Helianthus annuus HanXRQChr08 6 CH_han_1137 2 2 0.000579643
Lupinus albus Lalb_Chr18 6 CH_lal_210 3 3 0.000000231376
Magnolia biondii Chr11 6 CH_mbi_317 3 4 0.000000014152
Nelumbo nucifera chr3 6 CH_nnu_464 2 2 0.000144505
Olea europaea chr21 6 CH_oeu_116 3 3 0.0000000170963
Physcomitrium patens Chr19 6 CH_ppa_351 3 40 0.000554834
Phaseolus vulgaris Chr06 6 CH_pvu_625 2 2 0.000440836
Salix brachista GWHAAZH00000001 6 CH_sbr_711 2 2 0.000945209
Sequoiadendron giganteum chr2 6 CH_sgi_1996 2 3 0.000146142
Sapria himalayana scaffold21_10161493 6 CH_shi_408 2 3 0.000171536
Solanum lycopersicum SL4.0ch10 6 CH_sly_827 2 2 0.000352164
Solanum tuberosum ST4.03ch10 6 CH_stu_619 2 2 0.0000512453
Vanilla planifolia CM028153.1 6 CH_vpl_636 2 2 0.000443328
Vitis vinifera chr14 6 CH_vvi_317 3 4 0.000000347115

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001