Functional clusters

Information

  • Type InterPro
  • Description Photosystem II 5kDa protein, chloroplastic

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Glycine max Gm10 5 CH_gma_757 2 2 0.000227734
Glycine max Gm15 5 CH_gma_758 2 2 0.000227734
Medicago truncatula chr3 5 CH_mtr_1098 2 2 0.000123259
Nelumbo nucifera chr7 5 CH_nnu_463 2 2 0.000144505
Petunia axillaris Peaxi162Scf00032 5 CH_pax_681 2 3 0.000633164
Physcomitrium patens Chr05 5 CH_ppa_213 2 3 0.000183812
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_626 2 2 0.000227092
Glycine max Gm10 6 CH_gma_757 2 2 0.000227734
Glycine max Gm15 6 CH_gma_758 2 2 0.000227734
Medicago truncatula chr3 6 CH_mtr_1098 2 2 0.000123259
Nelumbo nucifera chr7 6 CH_nnu_463 2 2 0.000144505
Petunia axillaris Peaxi162Scf00032 6 CH_pax_681 2 3 0.000633164
Physcomitrium patens Chr05 6 CH_ppa_213 2 3 0.000183812
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_626 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001