Functional clusters

Information

  • Type InterPro
  • Description Nodulin-related protein 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 5 CH_amhyb_95 3 3 0.0000000425145
Brassica carinata ChrC07 5 CH_bca_1917 2 2 0.00059854
Brassica napus A08 5 CH_bna_1375 2 2 0.000519726
Brassica napus C08 5 CH_bna_1376 2 2 0.000519726
Brassica oleracea C8 5 CH_bol_679 2 2 0.000196117
Brassica rapa A08 5 CH_bra_477 2 2 0.000257588
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1055 2 3 0.000137561
Ceratophyllum demersum 1 5 CH_cde_352 2 2 0.000236939
Carya illinoinensis Chr05 5 CH_cil_591 2 2 0.0000619828
Corchorus olitorius AWUE01019716.1 5 CH_col_172 2 2 0.000292099
Carica papaya supercontig_1 5 CH_cpa_394 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_1000 5 CH_cqu_144 4 4 0.0000000000111703
Chenopodium quinoa C_Quinoa_Scaffold_2646 5 CH_cqu_321 3 3 0.000000117869
Durio zibethinus NW_019167971.1 5 CH_dzi_387 2 2 0.0000463489
Glycine max Gm07 5 CH_gma_660 2 2 0.000113867
Malus domestica Chr13 5 CH_mdo_1125 2 2 0.000227527
Malus domestica Chr16 5 CH_mdo_1126 2 2 0.000227527
Manihot esculenta Chromosome01 5 CH_mes_513 2 2 0.0000610631
Medicago truncatula chr4 5 CH_mtr_1386 2 4 0.000739503
Petunia axillaris Peaxi162Scf00314 5 CH_pax_466 2 2 0.0000703556
Punica granatum NC_045129.1 5 CH_pgr_478 2 3 0.000225098
Pisum sativum chr7LG7 5 CH_psa_562 2 2 0.00015649
Quercus lobata 3 5 CH_qlo_370 4 4 0.000000000000412889
Salvia bowleyana GWHASIU00000007 5 CH_sbo_247 4 22 0.0000000103274
Salix brachista GWHAAZH00000010 5 CH_sbr_552 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000004 5 CH_sci_316 2 2 0.0000851426
Sequoiadendron giganteum chr11 5 CH_sgi_1855 2 2 0.0000487151
Solanum pennellii Spenn-ch05 5 CH_spe_663 2 2 0.000133437
Theobroma cacao Chromosome_2 5 CH_tca_545 2 2 0.0000732386
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 6 CH_amhyb_95 3 3 0.0000000425145
Brassica carinata ChrC07 6 CH_bca_1917 2 2 0.00059854
Brassica napus A08 6 CH_bna_1375 2 2 0.000519726
Brassica napus C08 6 CH_bna_1376 2 2 0.000519726
Brassica oleracea C8 6 CH_bol_679 2 2 0.000196117
Brassica rapa A08 6 CH_bra_477 2 2 0.000257588
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1055 2 3 0.000137561
Ceratophyllum demersum 1 6 CH_cde_352 2 2 0.000236939
Carya illinoinensis Chr05 6 CH_cil_591 2 2 0.0000619828
Corchorus olitorius AWUE01019716.1 6 CH_col_172 2 2 0.000292099
Carica papaya supercontig_1 6 CH_cpa_394 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_1000 6 CH_cqu_144 4 4 0.0000000000111703
Chenopodium quinoa C_Quinoa_Scaffold_2646 6 CH_cqu_321 3 3 0.000000117869
Durio zibethinus NW_019167971.1 6 CH_dzi_387 2 2 0.0000463489
Glycine max Gm07 6 CH_gma_660 2 2 0.000113867
Malus domestica Chr13 6 CH_mdo_1125 2 2 0.000227527
Malus domestica Chr16 6 CH_mdo_1126 2 2 0.000227527
Manihot esculenta Chromosome01 6 CH_mes_513 2 2 0.0000610631
Medicago truncatula chr4 6 CH_mtr_1386 2 4 0.000739503
Petunia axillaris Peaxi162Scf00314 6 CH_pax_466 2 2 0.0000703556
Punica granatum NC_045129.1 6 CH_pgr_478 2 3 0.000225098
Pisum sativum chr7LG7 6 CH_psa_562 2 2 0.00015649
Quercus lobata 3 6 CH_qlo_370 4 4 0.000000000000412889
Salvia bowleyana GWHASIU00000007 6 CH_sbo_247 4 22 0.0000000103274
Salix brachista GWHAAZH00000010 6 CH_sbr_552 2 2 0.000189042
Simmondsia chinensis GWHAASQ00000004 6 CH_sci_316 2 2 0.0000851426
Sequoiadendron giganteum chr11 6 CH_sgi_1855 2 2 0.0000487151
Solanum pennellii Spenn-ch05 6 CH_spe_663 2 2 0.000133437
Theobroma cacao Chromosome_2 6 CH_tca_545 2 2 0.0000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001