Functional clusters
Information
- Type InterPro
- Description F-box domain containing protein At5g39450-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_7 | 5 | CH_aly_79 | 4 | 4 | 0.000000000000862747 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_53 | 5 | 14 | 0.0000000000000101148 |
| Brassica carinata | ChrB06 | 5 | CH_bca_7 | 10 | 28 | 2.47838e-29 |
| Brassica napus | A04 | 5 | CH_bna_191 | 4 | 5 | 0.000000000047482 |
| Brassica napus | C04 | 5 | CH_bna_45 | 6 | 8 | 1.28259e-18 |
| Brassica oleracea | C4 | 5 | CH_bol_206 | 3 | 4 | 0.0000000256409 |
| Brassica rapa | A04 | 5 | CH_bra_408 | 2 | 2 | 0.000128794 |
| Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_1189 | 2 | 4 | 0.000275116 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_85 | 5 | 7 | 0.0000000000000215721 |
| Erythranthe guttata | scaffold_12 | 5 | CH_egut_17 | 13 | 19 | 2.18374e-36 |
| Erythranthe guttata | scaffold_12 | 5 | CH_egut_387 | 3 | 3 | 0.00000540821 |
| Magnolia biondii | Chr03 | 5 | CH_mbi_352 | 3 | 5 | 0.0000000353791 |
| Medicago truncatula | chr8 | 5 | CH_mtr_1385 | 2 | 4 | 0.000739503 |
| Olea europaea | chr14 | 5 | CH_oeu_359 | 2 | 2 | 0.0000533789 |
| Petunia axillaris | Peaxi162Scf00711 | 5 | CH_pax_179 | 3 | 5 | 0.0000000742461 |
| Papaver somniferum | NC_039364.1 | 5 | CH_pso_1235 | 2 | 3 | 0.000675858 |
| Papaver somniferum | NC_039367.1 | 5 | CH_pso_487 | 3 | 6 | 0.000000152261 |
| Schrenkiella parvula | ch7-1 | 5 | CH_spa_42 | 4 | 6 | 0.0000000000219642 |
| Arabidopsis lyrata | scaffold_7 | 6 | CH_aly_79 | 4 | 4 | 0.000000000000862747 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_53 | 5 | 14 | 0.0000000000000101148 |
| Brassica carinata | ChrB06 | 6 | CH_bca_7 | 10 | 28 | 2.47838e-29 |
| Brassica napus | A04 | 6 | CH_bna_191 | 4 | 5 | 0.000000000047482 |
| Brassica napus | C04 | 6 | CH_bna_45 | 6 | 8 | 1.28259e-18 |
| Brassica oleracea | C4 | 6 | CH_bol_206 | 3 | 4 | 0.0000000256409 |
| Brassica rapa | A04 | 6 | CH_bra_408 | 2 | 2 | 0.000128794 |
| Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_1189 | 2 | 4 | 0.000275116 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_85 | 5 | 7 | 0.0000000000000215721 |
| Erythranthe guttata | scaffold_12 | 6 | CH_egut_17 | 13 | 19 | 2.18374e-36 |
| Erythranthe guttata | scaffold_12 | 6 | CH_egut_387 | 3 | 3 | 0.00000540821 |
| Magnolia biondii | Chr03 | 6 | CH_mbi_352 | 3 | 5 | 0.0000000353791 |
| Medicago truncatula | chr8 | 6 | CH_mtr_1385 | 2 | 4 | 0.000739503 |
| Olea europaea | chr14 | 6 | CH_oeu_359 | 2 | 2 | 0.0000533789 |
| Petunia axillaris | Peaxi162Scf00711 | 6 | CH_pax_179 | 3 | 5 | 0.0000000742461 |
| Papaver somniferum | NC_039364.1 | 6 | CH_pso_1235 | 2 | 3 | 0.000675858 |
| Papaver somniferum | NC_039367.1 | 6 | CH_pso_487 | 3 | 6 | 0.000000152261 |
| Schrenkiella parvula | ch7-1 | 6 | CH_spa_42 | 4 | 6 | 0.0000000000219642 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |