Functional clusters
Information
- Type InterPro
- Description Protein down-regulated in DIF1 11
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_74 | 5 | 5 | 0.000000000000183239 |
| Arabidopsis thaliana | Chr2 | 5 | CH_ath_394 | 3 | 8 | 0.0000468448 |
| Brassica carinata | ChrC05 | 5 | CH_bca_54 | 6 | 6 | 2.31242e-17 |
| Brassica carinata | ChrC09 | 5 | CH_bca_55 | 8 | 35 | 2.35131e-17 |
| Brassica napus | C01 | 5 | CH_bna_2 | 19 | 38 | 2.07973e-54 |
| Brassica napus | A05 | 5 | CH_bna_271 | 4 | 4 | 0.000000000889768 |
| Brassica napus | C05 | 5 | CH_bna_37 | 7 | 8 | 1.38597e-19 |
| Brassica oleracea | C1 | 5 | CH_bol_2 | 17 | 28 | 1.66921e-48 |
| Brassica oleracea | C5 | 5 | CH_bol_41 | 6 | 7 | 0.00000000000000173917 |
| Brassica rapa | A05 | 5 | CH_bra_10 | 6 | 6 | 2.75694e-19 |
| Capsella rubella | scaffold_4 | 5 | CH_cru_279 | 3 | 3 | 0.000000449069 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_681 | 3 | 3 | 0.0000000513834 |
| Glycine max | Gm06 | 5 | CH_gma_96 | 4 | 4 | 0.00000000000016405 |
| Lupinus albus | Lalb_Chr19 | 5 | CH_lal_419 | 2 | 2 | 0.0000524824 |
| Prunus persica | Pp06 | 5 | CH_ppe_26 | 9 | 10 | 1.36045e-28 |
| Populus trichocarpa | Chr02 | 5 | CH_ptr_144 | 4 | 4 | 0.00000000000289678 |
| Quercus lobata | CM012294 | 5 | CH_qlo_629 | 3 | 3 | 0.00000000399842 |
| Schrenkiella parvula | ch4-2 | 5 | CH_spa_55 | 4 | 5 | 0.000000000256235 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_543 | 2 | 2 | 0.0000732386 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_74 | 5 | 5 | 0.000000000000183239 |
| Arabidopsis thaliana | Chr2 | 6 | CH_ath_394 | 3 | 8 | 0.0000468448 |
| Brassica carinata | ChrC05 | 6 | CH_bca_54 | 6 | 6 | 2.31242e-17 |
| Brassica carinata | ChrC09 | 6 | CH_bca_55 | 8 | 35 | 2.35131e-17 |
| Brassica napus | C01 | 6 | CH_bna_2 | 19 | 38 | 2.07973e-54 |
| Brassica napus | A05 | 6 | CH_bna_271 | 4 | 4 | 0.000000000889768 |
| Brassica napus | C05 | 6 | CH_bna_37 | 7 | 8 | 1.38597e-19 |
| Brassica oleracea | C1 | 6 | CH_bol_2 | 17 | 28 | 1.66921e-48 |
| Brassica oleracea | C5 | 6 | CH_bol_41 | 6 | 7 | 0.00000000000000173917 |
| Brassica rapa | A05 | 6 | CH_bra_10 | 6 | 6 | 2.75694e-19 |
| Capsella rubella | scaffold_4 | 6 | CH_cru_279 | 3 | 3 | 0.000000449069 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_681 | 3 | 3 | 0.0000000513834 |
| Glycine max | Gm06 | 6 | CH_gma_96 | 4 | 4 | 0.00000000000016405 |
| Lupinus albus | Lalb_Chr19 | 6 | CH_lal_419 | 2 | 2 | 0.0000524824 |
| Prunus persica | Pp06 | 6 | CH_ppe_26 | 9 | 10 | 1.36045e-28 |
| Populus trichocarpa | Chr02 | 6 | CH_ptr_144 | 4 | 4 | 0.00000000000289678 |
| Quercus lobata | CM012294 | 6 | CH_qlo_629 | 3 | 3 | 0.00000000399842 |
| Schrenkiella parvula | ch4-2 | 6 | CH_spa_55 | 4 | 5 | 0.000000000256235 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_543 | 2 | 2 | 0.0000732386 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |