Functional clusters
Information
- Type InterPro
- Description U3 small nucleolar RNA-associated protein 10
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-5 | 5 | CH_aar_320 | 2 | 3 | 0.000273685 |
| Acer truncatum | chr1 | 5 | CH_acertr_633 | 2 | 2 | 0.000070497 |
| Brassica oleracea | C5 | 5 | CH_bol_678 | 2 | 2 | 0.000196117 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_252 | 3 | 10 | 0.000000775969 |
| Capsicum annuum | PGAv.1.6.scaffold485 | 5 | CH_can_589 | 2 | 2 | 0.0000826105 |
| Citrullus lanatus | CG_Chr07 | 5 | CH_cla_233 | 2 | 2 | 0.0000887115 |
| Carica papaya | supercontig_13 | 5 | CH_cpa_141 | 3 | 5 | 0.000000135557 |
| Magnolia biondii | Chr13 | 5 | CH_mbi_232 | 4 | 4 | 0.000000000344022 |
| Magnolia biondii | Chr01 | 5 | CH_mbi_52 | 7 | 9 | 1.27675e-19 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_814 | 3 | 8 | 0.0000720393 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_983 | 2 | 2 | 0.000135176 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_999 | 2 | 2 | 0.0000398653 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_496 | 2 | 2 | 0.000045498 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_980 | 3 | 5 | 0.0000000355966 |
| Sapria himalayana | scaffold21_10161493 | 5 | CH_shi_64 | 4 | 10 | 0.000000000117773 |
| Selaginella moellendorffii | scaffold_3 | 5 | CH_smo_282 | 2 | 2 | 0.000280112 |
| Tarenaya hassleriana | NW_010970490.1 | 5 | CH_tha_105 | 3 | 4 | 0.000000117084 |
| Aethionema arabicum | LG-5 | 6 | CH_aar_320 | 2 | 3 | 0.000273685 |
| Acer truncatum | chr1 | 6 | CH_acertr_633 | 2 | 2 | 0.000070497 |
| Brassica oleracea | C5 | 6 | CH_bol_678 | 2 | 2 | 0.000196117 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_252 | 3 | 10 | 0.000000775969 |
| Capsicum annuum | PGAv.1.6.scaffold485 | 6 | CH_can_589 | 2 | 2 | 0.0000826105 |
| Citrullus lanatus | CG_Chr07 | 6 | CH_cla_233 | 2 | 2 | 0.0000887115 |
| Carica papaya | supercontig_13 | 6 | CH_cpa_141 | 3 | 5 | 0.000000135557 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_404 | 3 | 8 | 0.000000575123 |
| Magnolia biondii | Chr13 | 6 | CH_mbi_232 | 4 | 4 | 0.000000000344022 |
| Magnolia biondii | Chr01 | 6 | CH_mbi_52 | 7 | 9 | 1.27675e-19 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_814 | 3 | 8 | 0.0000720393 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_983 | 2 | 2 | 0.000135176 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_999 | 2 | 2 | 0.0000398653 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_496 | 2 | 2 | 0.000045498 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_980 | 3 | 5 | 0.0000000355966 |
| Sapria himalayana | scaffold21_10161493 | 6 | CH_shi_64 | 4 | 10 | 0.000000000117773 |
| Selaginella moellendorffii | scaffold_3 | 6 | CH_smo_282 | 2 | 2 | 0.000280112 |
| Tarenaya hassleriana | NW_010970490.1 | 6 | CH_tha_105 | 3 | 4 | 0.000000117084 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |