Functional clusters

Information

  • Type InterPro
  • Description Not2/Not3/Not5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 5 CH_ach_628 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 5 CH_amhyb_399 2 2 0.000505051
Brassica napus C02 5 CH_bna_537 3 3 0.000000500786
Ceratophyllum demersum 2 5 CH_cde_99 3 3 0.000000327496
Cardamine hirsuta Chr7 5 CH_chi_798 2 2 0.000691204
Chenopodium quinoa C_Quinoa_Scaffold_3107 5 CH_cqu_1080 2 2 0.000995025
Helianthus annuus HanXRQChr05 5 CH_han_500 3 3 0.000000369592
Sequoiadendron giganteum chr3 5 CH_sgi_1166 3 4 0.000000284764
Sapria himalayana scaffold36_5715340 5 CH_shi_40 5 17 0.00000000000297546
Utricularia gibba unitig_699 5 CH_ugi_392 2 2 0.000820479
Vaccinium macrocarpon scaffold00267_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_722 2 2 0.000557543
Actinidia chinensis Lachesis_group9 6 CH_ach_628 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 6 CH_amhyb_399 2 2 0.000505051
Brassica napus C02 6 CH_bna_537 3 3 0.000000500786
Ceratophyllum demersum 2 6 CH_cde_99 3 3 0.000000327496
Cardamine hirsuta Chr7 6 CH_chi_798 2 2 0.000691204
Chenopodium quinoa C_Quinoa_Scaffold_3107 6 CH_cqu_1080 2 2 0.000995025
Helianthus annuus HanXRQChr05 6 CH_han_500 3 3 0.000000369592
Sequoiadendron giganteum chr3 6 CH_sgi_1166 3 4 0.000000284764
Sapria himalayana scaffold36_5715340 6 CH_shi_40 5 17 0.00000000000297546
Utricularia gibba unitig_699 6 CH_ugi_392 2 2 0.000820479
Vaccinium macrocarpon scaffold00267_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_722 2 2 0.000557543

Available child term results

Ontology identifier Description Number of clusters
IPR012270 CCR4-NOT complex, subunit 3/ 5 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001