Functional clusters

Information

  • Type InterPro
  • Description DNA repair/transcription protein MET18/MMS19

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 5 CH_aar_401 2 2 0.000547395
Beta vulgaris Chr9_EL10_PGA_scaffold8 5 CH_bvu_362 2 2 0.0000827917
Camellia sinensis var. sinensis Chr15 5 CH_camsi_297 4 16 0.000000000526327
Ceratophyllum demersum 3 5 CH_cde_249 2 2 0.0000789796
Carica papaya supercontig_25 5 CH_cpa_47 4 6 0.0000000000386643
Petunia axillaris Peaxi162Scf00038 5 CH_pax_464 2 2 0.0000703556
Salix brachista GWHAAZH00000003 5 CH_sbr_478 2 2 0.000063014
Sequoiadendron giganteum chr10 5 CH_sgi_1849 2 2 0.0000487151
Sapria himalayana scaffold13_12996478 5 CH_shi_145 3 6 0.0000000980824
Trochodendron aralioides group9 5 CH_tar_88 4 4 0.00000000000324623
Utricularia gibba unitig_88 5 CH_ugi_196 2 2 0.0000820479
Aethionema arabicum LG-9 6 CH_aar_401 2 2 0.000547395
Beta vulgaris Chr9_EL10_PGA_scaffold8 6 CH_bvu_362 2 2 0.0000827917
Camellia sinensis var. sinensis Chr15 6 CH_camsi_297 4 16 0.000000000526327
Ceratophyllum demersum 3 6 CH_cde_249 2 2 0.0000789796
Carica papaya supercontig_25 6 CH_cpa_47 4 6 0.0000000000386643
Petunia axillaris Peaxi162Scf00038 6 CH_pax_464 2 2 0.0000703556
Salix brachista GWHAAZH00000003 6 CH_sbr_478 2 2 0.000063014
Sequoiadendron giganteum chr10 6 CH_sgi_1849 2 2 0.0000487151
Sapria himalayana scaffold13_12996478 6 CH_shi_145 3 6 0.0000000980824
Trochodendron aralioides group9 6 CH_tar_88 4 4 0.00000000000324623
Utricularia gibba unitig_88 6 CH_ugi_196 2 2 0.0000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001