Functional clusters

Information

  • Type InterPro
  • Description Coiled-coil domain-containing protein R3HC1/R3HCL

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00030 5 CH_atr_412 2 2 0.0000794407
Brassica carinata ChrC01 5 CH_bca_1527 2 3 0.000192384
Hydrangea macrophylla Hma1.2p1_0101F.1 5 CH_hma_458 2 2 0.000111086
Quercus lobata 1 5 CH_qlo_1286 2 2 0.0000516289
Salix brachista GWHAAZH00000016 5 CH_sbr_477 2 2 0.000063014
Theobroma cacao Chromosome_9 5 CH_tca_587 2 3 0.000219708
Amborella trichopoda AmTr_v1.0_scaffold00030 6 CH_atr_412 2 2 0.0000794407
Brassica carinata ChrC01 6 CH_bca_1527 2 3 0.000192384
Hydrangea macrophylla Hma1.2p1_0101F.1 6 CH_hma_458 2 2 0.000111086
Quercus lobata 1 6 CH_qlo_1286 2 2 0.0000516289
Salix brachista GWHAAZH00000016 6 CH_sbr_477 2 2 0.000063014
Theobroma cacao Chromosome_9 6 CH_tca_587 2 3 0.000219708

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001