Functional clusters
Information
- Type InterPro
- Description Transcriptional regulatory protein Sin3-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_281 | 3 | 3 | 0.00000007455 |
| Actinidia chinensis | Lachesis_group15 | 5 | CH_ach_282 | 3 | 12 | 0.000054469 |
| Brassica napus | C09 | 5 | CH_bna_496 | 4 | 7 | 0.000000264932 |
| Brassica oleracea | C9 | 5 | CH_bol_89 | 5 | 6 | 0.00000000000414579 |
| Ceratophyllum demersum | 2 | 5 | CH_cde_444 | 2 | 2 | 0.000473878 |
| Ceratophyllum demersum | 4 | 5 | CH_cde_445 | 2 | 2 | 0.000473878 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_558 | 3 | 6 | 0.000116812 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_63 | 6 | 6 | 6.5923e-16 |
| Capsella rubella | scaffold_6 | 5 | CH_cru_185 | 4 | 4 | 0.00000000857849 |
| Davidia involucrata | GWHABJS00000008 | 5 | CH_din_823 | 2 | 2 | 0.000750188 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_368 | 3 | 3 | 0.000000437284 |
| Magnolia biondii | Chr15 | 5 | CH_mbi_300 | 5 | 66 | 0.00000000780096 |
| Medicago truncatula | chr1 | 5 | CH_mtr_218 | 6 | 8 | 0.000000000000171319 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_1017 | 3 | 10 | 0.0000471552 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_745 | 2 | 2 | 0.00068247 |
| Sechium edule | LG08 | 5 | CH_sed_472 | 2 | 2 | 0.000428052 |
| Sapria himalayana | scaffold24_7948270 | 5 | CH_shi_15 | 6 | 10 | 2.42586e-16 |
| Sapria himalayana | scaffold33_6547121 | 5 | CH_shi_201 | 3 | 4 | 0.00000164767 |
| Schrenkiella parvula | ch3-2 | 5 | CH_spa_173 | 3 | 3 | 0.0000052074 |
| Trochodendron aralioides | group12 | 5 | CH_tar_972 | 2 | 2 | 0.000900549 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_65 | 5 | 5 | 0.00000000000152417 |
| Zea mays | 3 | 5 | CH_zma_190 | 3 | 3 | 0.000000219616 |
| Acer truncatum | chr4 | 6 | CH_acertr_281 | 3 | 3 | 0.00000007455 |
| Actinidia chinensis | Lachesis_group15 | 6 | CH_ach_282 | 3 | 12 | 0.000054469 |
| Brassica napus | C09 | 6 | CH_bna_496 | 4 | 7 | 0.000000264932 |
| Brassica oleracea | C9 | 6 | CH_bol_89 | 5 | 6 | 0.00000000000414579 |
| Ceratophyllum demersum | 2 | 6 | CH_cde_444 | 2 | 2 | 0.000473878 |
| Ceratophyllum demersum | 4 | 6 | CH_cde_445 | 2 | 2 | 0.000473878 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_558 | 3 | 6 | 0.000116812 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_63 | 6 | 6 | 6.5923e-16 |
| Capsella rubella | scaffold_6 | 6 | CH_cru_185 | 4 | 4 | 0.00000000857849 |
| Davidia involucrata | GWHABJS00000008 | 6 | CH_din_823 | 2 | 2 | 0.000750188 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_368 | 3 | 3 | 0.000000437284 |
| Magnolia biondii | Chr15 | 6 | CH_mbi_300 | 5 | 66 | 0.00000000780096 |
| Medicago truncatula | chr1 | 6 | CH_mtr_218 | 6 | 8 | 0.000000000000171319 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_1017 | 3 | 10 | 0.0000471552 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_745 | 2 | 2 | 0.00068247 |
| Sechium edule | LG08 | 6 | CH_sed_472 | 2 | 2 | 0.000428052 |
| Sapria himalayana | scaffold24_7948270 | 6 | CH_shi_15 | 6 | 10 | 2.42586e-16 |
| Sapria himalayana | scaffold33_6547121 | 6 | CH_shi_201 | 3 | 4 | 0.00000164767 |
| Schrenkiella parvula | ch3-2 | 6 | CH_spa_173 | 3 | 3 | 0.0000052074 |
| Trochodendron aralioides | group12 | 6 | CH_tar_972 | 2 | 2 | 0.000900549 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_65 | 5 | 5 | 0.00000000000152417 |
| Zea mays | 3 | 6 | CH_zma_190 | 3 | 3 | 0.000000219616 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |