Functional clusters

Information

  • Type InterPro
  • Description Vacuolar protein sorting-associated protein 53

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_8 5 CH_ccl_620 2 3 0.000246083
Cardamine hirsuta Chr1 5 CH_chi_727 2 2 0.000414723
Eutrema salsugineum scaffold_7 5 CH_esa_349 2 2 0.0000761499
Magnolia biondii Chr18 5 CH_mbi_774 2 2 0.0000485661
Sequoiadendron giganteum chr1 5 CH_sgi_1086 3 3 0.000000124594
Sequoiadendron giganteum chr1 5 CH_sgi_631 4 5 0.0000000000606942
Schrenkiella parvula ch1-2 5 CH_spa_255 3 41 0.0000989782
Solanum tuberosum ST4.03ch04 5 CH_stu_616 2 2 0.0000512453
Vanilla planifolia CM028151.1 5 CH_vpl_435 2 2 0.000073888
Citrus clementina scaffold_8 6 CH_ccl_620 2 3 0.000246083
Cardamine hirsuta Chr1 6 CH_chi_727 2 2 0.000414723
Eutrema salsugineum scaffold_7 6 CH_esa_349 2 2 0.0000761499
Magnolia biondii Chr18 6 CH_mbi_774 2 2 0.0000485661
Sequoiadendron giganteum chr1 6 CH_sgi_1086 3 3 0.000000124594
Sequoiadendron giganteum chr1 6 CH_sgi_631 4 5 0.0000000000606942
Schrenkiella parvula ch1-2 6 CH_spa_255 3 41 0.0000989782
Solanum tuberosum ST4.03ch04 6 CH_stu_616 2 2 0.0000512453
Vanilla planifolia CM028151.1 6 CH_vpl_435 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001