Functional clusters

Information

  • Type InterPro
  • Description Ribosome biogenesis protein Bms1/Tsr1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_355 2 2 0.000273698
Actinidia chinensis Lachesis_group0 5 CH_ach_103 3 3 0.0000000885264
Amborella trichopoda AmTr_v1.0_scaffold00106 5 CH_atr_514 2 2 0.000238322
Brassica carinata ChrB04 5 CH_bca_1813 2 2 0.000448905
Capsicum annuum PGAv.1.6.scaffold134 5 CH_can_830 2 3 0.000743443
Citrus clementina scaffold_8 5 CH_ccl_256 4 9 0.000000014595
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_694 2 2 0.000269233
Erythranthe guttata scaffold_1 5 CH_egut_607 2 2 0.000218444
Gossypium hirsutum D03 5 CH_ghi_1354 2 2 0.000961256
Helianthus annuus HanXRQChr14 5 CH_han_1005 2 2 0.000231857
Lupinus albus Lalb_Chr19 5 CH_lal_187 3 3 0.0000000826343
Lupinus albus Lalb_Chr01 5 CH_lal_780 2 2 0.000787236
Lonicera japonica GWHAAZE00000001 5 CH_lonja_390 3 3 0.0000000215197
Papaver somniferum NW_020624377.1 5 CH_pso_142 7 10 0.0000000000000183489
Papaver somniferum NW_020625486.1 5 CH_pso_482 4 4 0.000000129145
Papaver somniferum NC_039360.1 5 CH_pso_513 5 14 0.000000274475
Papaver somniferum NC_039362.1 5 CH_pso_754 5 29 0.0000160645
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_597 3 4 0.0000001907
Salix brachista GWHAAZH00000017 5 CH_sbr_360 3 4 0.00000524029
Salix brachista GWHAAZH00000017 5 CH_sbr_39 8 20 7.74068e-20
Simmondsia chinensis GWHAASQ00000013 5 CH_sci_109 3 3 0.0000000434974
Sapria himalayana scaffold1_25991295 5 CH_shi_56 4 5 0.0000000000420659
Utricularia gibba unitig_748 5 CH_ugi_278 2 2 0.000246144
Aethionema arabicum LG-5 6 CH_aar_355 2 2 0.000273698
Actinidia chinensis Lachesis_group0 6 CH_ach_103 3 3 0.0000000885264
Amborella trichopoda AmTr_v1.0_scaffold00106 6 CH_atr_514 2 2 0.000238322
Brassica carinata ChrB04 6 CH_bca_1813 2 2 0.000448905
Capsicum annuum PGAv.1.6.scaffold134 6 CH_can_830 2 3 0.000743443
Citrus clementina scaffold_8 6 CH_ccl_256 4 9 0.000000014595
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_694 2 2 0.000269233
Erythranthe guttata scaffold_1 6 CH_egut_607 2 2 0.000218444
Gossypium hirsutum D03 6 CH_ghi_1354 2 2 0.000961256
Helianthus annuus HanXRQChr14 6 CH_han_1005 2 2 0.000231857
Lupinus albus Lalb_Chr19 6 CH_lal_187 3 3 0.0000000826343
Lupinus albus Lalb_Chr01 6 CH_lal_780 2 2 0.000787236
Lonicera japonica GWHAAZE00000001 6 CH_lonja_390 3 3 0.0000000215197
Papaver somniferum NW_020624377.1 6 CH_pso_142 7 10 0.0000000000000183489
Papaver somniferum NW_020625486.1 6 CH_pso_482 4 4 0.000000129145
Papaver somniferum NC_039360.1 6 CH_pso_513 5 14 0.000000274475
Papaver somniferum NC_039362.1 6 CH_pso_754 5 29 0.0000160645
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_597 3 4 0.0000001907
Salix brachista GWHAAZH00000017 6 CH_sbr_360 3 4 0.00000524029
Salix brachista GWHAAZH00000017 6 CH_sbr_39 8 20 7.74068e-20
Simmondsia chinensis GWHAASQ00000013 6 CH_sci_109 3 3 0.0000000434974
Sapria himalayana scaffold1_25991295 6 CH_shi_56 4 5 0.0000000000420659
Utricularia gibba unitig_748 6 CH_ugi_278 2 2 0.000246144

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001