Functional clusters

Information

  • Type InterPro
  • Description Polyprenol reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 5 CH_acertr_377 3 12 0.00000163958
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 5 CH_amhyb_239 2 2 0.0000841751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 5 CH_arhy_314 4 6 0.0000000000845197
Brassica carinata ChrC04 5 CH_bca_1812 2 2 0.000448905
Brassica napus A03 5 CH_bna_1372 2 2 0.000519726
Brassica napus C03 5 CH_bna_1373 2 2 0.000519726
Brassica oleracea C3 5 CH_bol_676 2 2 0.000196117
Brassica rapa A03 5 CH_bra_473 2 2 0.000257588
Fragaria vesca Fvb2 5 CH_fve_552 2 2 0.0000589102
Gossypium hirsutum A13 5 CH_ghi_1218 2 2 0.000560733
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_621 3 44 0.0000524326
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_458 3 4 0.00000000953543
Sequoiadendron giganteum chr3 5 CH_sgi_1843 2 2 0.0000487151
Schrenkiella parvula ch3-5 5 CH_spa_84 3 3 0.00000000929892
Acer truncatum chr5 6 CH_acertr_377 3 12 0.00000163958
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 6 CH_amhyb_239 2 2 0.0000841751
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.12 6 CH_arhy_314 4 6 0.0000000000845197
Brassica carinata ChrC04 6 CH_bca_1812 2 2 0.000448905
Brassica napus A03 6 CH_bna_1372 2 2 0.000519726
Brassica napus C03 6 CH_bna_1373 2 2 0.000519726
Brassica oleracea C3 6 CH_bol_676 2 2 0.000196117
Brassica rapa A03 6 CH_bra_473 2 2 0.000257588
Fragaria x ananassa Fvb2-4 6 CH_fan_904 2 2 0.000185036
Fragaria vesca Fvb2 6 CH_fve_552 2 2 0.0000589102
Gossypium hirsutum A13 6 CH_ghi_1218 2 2 0.000560733
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_621 3 44 0.0000524326
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_458 3 4 0.00000000953543
Sequoiadendron giganteum chr3 6 CH_sgi_1843 2 2 0.0000487151
Schrenkiella parvula ch3-5 6 CH_spa_84 3 3 0.00000000929892

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001