Functional clusters

Information

  • Type InterPro
  • Description FANCM/Mph1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 5 CH_acertr_629 2 2 0.000070497
Aquilegia oxysepala CHR04 5 CH_aox_439 2 2 0.000240597
Carya illinoinensis Chr03 5 CH_cil_588 2 2 0.0000619828
Citrullus lanatus CG_Chr11 5 CH_cla_83 3 5 0.0000000472183
Carica papaya supercontig_66 5 CH_cpa_465 2 3 0.000285185
Davidia involucrata GWHABJS00000011 5 CH_din_468 2 2 0.0000500125
Durio zibethinus NW_019168004.1 5 CH_dzi_386 2 2 0.0000463489
Magnolia biondii Chr17 5 CH_mbi_384 3 6 0.0000000707565
Nicotiana tabacum Nitab4.5_0000167 5 CH_nta_65 3 3 0.0000000180611
Petunia axillaris Peaxi162Scf00391 5 CH_pax_136 3 3 0.00000000742514
Populus trichocarpa Chr13 5 CH_ptr_658 2 4 0.000346781
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1149 2 2 0.000119596
Rhododendron simsii chr11 5 CH_rsi_697 2 2 0.0000645307
Simmondsia chinensis GWHAASQ00000023 5 CH_sci_313 2 2 0.0000851426
Sequoiadendron giganteum chr4 5 CH_sgi_1841 2 2 0.0000487151
Solanum lycopersicum SL4.0ch11 5 CH_sly_620 2 2 0.0000586941
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_494 2 2 0.0000929238
Vigna mungo CM024076.1 5 CH_vmu_417 2 3 0.000193836
Vanilla planifolia CM028150.1 5 CH_vpl_431 2 2 0.000073888
Acer truncatum chr13 6 CH_acertr_629 2 2 0.000070497
Aquilegia oxysepala CHR04 6 CH_aox_439 2 2 0.000240597
Carya illinoinensis Chr03 6 CH_cil_588 2 2 0.0000619828
Citrullus lanatus CG_Chr11 6 CH_cla_83 3 5 0.0000000472183
Carica papaya supercontig_66 6 CH_cpa_465 2 3 0.000285185
Davidia involucrata GWHABJS00000011 6 CH_din_468 2 2 0.0000500125
Durio zibethinus NW_019168004.1 6 CH_dzi_386 2 2 0.0000463489
Magnolia biondii Chr17 6 CH_mbi_384 3 6 0.0000000707565
Nicotiana tabacum Nitab4.5_0000167 6 CH_nta_65 3 3 0.0000000180611
Petunia axillaris Peaxi162Scf00391 6 CH_pax_136 3 3 0.00000000742514
Populus trichocarpa Chr13 6 CH_ptr_658 2 4 0.000346781
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1149 2 2 0.000119596
Rhododendron simsii chr11 6 CH_rsi_697 2 2 0.0000645307
Simmondsia chinensis GWHAASQ00000023 6 CH_sci_313 2 2 0.0000851426
Sequoiadendron giganteum chr4 6 CH_sgi_1841 2 2 0.0000487151
Solanum lycopersicum SL4.0ch11 6 CH_sly_620 2 2 0.0000586941
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_494 2 2 0.0000929238
Vigna mungo CM024076.1 6 CH_vmu_417 2 3 0.000193836
Vanilla planifolia CM028150.1 6 CH_vpl_431 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001