Functional clusters

Information

  • Type InterPro
  • Description Lactose permease-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group0 5 CH_ach_388 2 2 0.000162964
Beta vulgaris Chr1_EL10_PGA_scaffold3 5 CH_bvu_360 2 2 0.0000827917
Erythranthe guttata scaffold_2 5 CH_egut_228 3 3 0.00000000795325
Nelumbo nucifera chr2 5 CH_nnu_459 2 2 0.000144505
Nicotiana tabacum Nitab4.5_0000468 5 CH_nta_223 2 2 0.000109727
Petunia axillaris Peaxi162Scf00402 5 CH_pax_680 2 3 0.000633164
Quercus lobata 4 5 CH_qlo_1090 3 25 0.00000919114
Sequoiadendron giganteum chr7 5 CH_sgi_1840 2 2 0.0000487151
Solanum lycopersicum SL4.0ch01 5 CH_sly_739 2 2 0.000176082
Solanum pennellii Spenn-ch01 5 CH_spe_661 2 2 0.000133437
Solanum tuberosum ST4.03ch01 5 CH_stu_796 2 2 0.000307472
Actinidia chinensis Lachesis_group0 6 CH_ach_388 2 2 0.000162964
Beta vulgaris Chr1_EL10_PGA_scaffold3 6 CH_bvu_360 2 2 0.0000827917
Erythranthe guttata scaffold_2 6 CH_egut_228 3 3 0.00000000795325
Fragaria x ananassa Fvb7-4 6 CH_fan_350 3 9 0.000000172546
Nelumbo nucifera chr2 6 CH_nnu_459 2 2 0.000144505
Nicotiana tabacum Nitab4.5_0000468 6 CH_nta_223 2 2 0.000109727
Petunia axillaris Peaxi162Scf00402 6 CH_pax_680 2 3 0.000633164
Quercus lobata 4 6 CH_qlo_1090 3 25 0.00000919114
Sequoiadendron giganteum chr7 6 CH_sgi_1840 2 2 0.0000487151
Solanum lycopersicum SL4.0ch01 6 CH_sly_739 2 2 0.000176082
Solanum pennellii Spenn-ch01 6 CH_spe_661 2 2 0.000133437
Solanum tuberosum ST4.03ch01 6 CH_stu_796 2 2 0.000307472

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001