Functional clusters

Information

  • Type InterPro
  • Description Sterol transport protein NPC2-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB04 5 CH_bca_141 6 14 0.00000000000098161
Brassica carinata ChrC01 5 CH_bca_334 4 4 0.00000000241036
Brassica napus C03 5 CH_bna_210 5 9 0.000000000136885
Brassica napus A03 5 CH_bna_364 4 5 0.0000000142886
Brassica napus C09 5 CH_bna_907 3 4 0.0000293251
Brassica oleracea C3 5 CH_bol_111 5 9 0.000000000127934
Brassica rapa A03 5 CH_bra_56 5 7 0.00000000000829138
Cardamine hirsuta Chr3 5 CH_chi_148 4 4 0.000000000124841
Malus domestica Chr12 5 CH_mdo_1252 2 2 0.000379212
Brassica carinata ChrB04 6 CH_bca_141 6 14 0.00000000000098161
Brassica carinata ChrC01 6 CH_bca_334 4 4 0.00000000241036
Brassica napus C03 6 CH_bna_210 5 9 0.000000000136885
Brassica napus A03 6 CH_bna_364 4 5 0.0000000142886
Brassica napus C09 6 CH_bna_907 3 4 0.0000293251
Brassica oleracea C3 6 CH_bol_111 5 9 0.000000000127934
Brassica rapa A03 6 CH_bra_56 5 7 0.00000000000829138
Cardamine hirsuta Chr3 6 CH_chi_148 4 4 0.000000000124841
Malus domestica Chr12 6 CH_mdo_1252 2 2 0.000379212

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001