Functional clusters

Information

  • Type InterPro
  • Description Transcription elongation factor SPT5

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 5 CH_acertr_785 2 2 0.000211491
Amborella trichopoda AmTr_v1.0_scaffold00002 5 CH_atr_300 3 6 0.00000662348
Brassica rapa A09 5 CH_bra_143 3 3 0.0000000552942
Capsicum annuum PGAv.1.6.scaffold371 5 CH_can_442 3 5 0.00000859531
Ceratophyllum demersum 4 5 CH_cde_530 2 2 0.000789796
Ceratophyllum demersum 5 5 CH_cde_531 2 2 0.000789796
Fragaria vesca Fvb7 5 CH_fve_724 2 2 0.000353461
Lupinus albus Lalb_Chr02 5 CH_lal_779 2 2 0.000787236
Malus domestica Chr10 5 CH_mdo_667 3 8 0.00000422624
Medicago truncatula chr1 5 CH_mtr_1353 2 2 0.000616295
Populus trichocarpa Chr10 5 CH_ptr_757 2 2 0.000578001
Simmondsia chinensis GWHAASQ00000009 5 CH_sci_157 3 4 0.000000434928
Sequoiadendron giganteum chr7 5 CH_sgi_2324 2 2 0.000292291
Solanum tuberosum ST4.03ch04 5 CH_stu_676 2 3 0.000153732
Acer truncatum chr13 6 CH_acertr_785 2 2 0.000211491
Amborella trichopoda AmTr_v1.0_scaffold00002 6 CH_atr_300 3 6 0.00000662348
Brassica rapa A09 6 CH_bra_143 3 3 0.0000000552942
Capsicum annuum PGAv.1.6.scaffold371 6 CH_can_442 3 5 0.00000859531
Ceratophyllum demersum 4 6 CH_cde_530 2 2 0.000789796
Ceratophyllum demersum 5 6 CH_cde_531 2 2 0.000789796
Fragaria vesca Fvb7 6 CH_fve_724 2 2 0.000353461
Lupinus albus Lalb_Chr02 6 CH_lal_779 2 2 0.000787236
Malus domestica Chr10 6 CH_mdo_667 3 8 0.00000422624
Medicago truncatula chr1 6 CH_mtr_1353 2 2 0.000616295
Populus trichocarpa Chr10 6 CH_ptr_757 2 2 0.000578001
Simmondsia chinensis GWHAASQ00000009 6 CH_sci_157 3 4 0.000000434928
Sequoiadendron giganteum chr7 6 CH_sgi_2324 2 2 0.000292291
Solanum tuberosum ST4.03ch04 6 CH_stu_676 2 3 0.000153732

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001