Functional clusters
Information
- Type InterPro
- Description Dimethylallyltransferase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 5 | CH_acertr_370 | 3 | 3 | 0.00000123008 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 5 | CH_amhyb_476 | 2 | 2 | 0.000841751 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_202 | 9 | 45 | 8.33523e-18 |
| Medicago truncatula | chr3 | 5 | CH_mtr_196 | 8 | 38 | 0.000000000000031642 |
| Medicago truncatula | chr7 | 5 | CH_mtr_805 | 3 | 3 | 0.00000658367 |
| Medicago truncatula | chr6 | 5 | CH_mtr_806 | 3 | 3 | 0.00000658367 |
| Physcomitrium patens | Chr23 | 5 | CH_ppa_96 | 3 | 6 | 0.00000630472 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_314 | 3 | 5 | 0.0000034276 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_911 | 3 | 6 | 0.0000216806 |
| Sechium edule | LG10 | 5 | CH_sed_365 | 3 | 6 | 0.000124436 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_937 | 3 | 3 | 0.0000000142393 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_25 | 12 | 14 | 3.6441e-26 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_3 | 17 | 18 | 1.97037e-40 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_62 | 11 | 28 | 4.12679e-18 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_80 | 12 | 54 | 1.27435e-16 |
| Solanum lycopersicum | SL4.0ch11 | 5 | CH_sly_9 | 22 | 77 | 1.87445e-36 |
| Solanum pennellii | Spenn-ch11 | 5 | CH_spe_392 | 4 | 24 | 0.00000279693 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_109 | 7 | 7 | 0.00000000000000453229 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_123 | 10 | 42 | 0.0000000000000397224 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_209 | 8 | 35 | 0.00000000019077 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_272 | 5 | 6 | 0.0000000074494 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_387 | 4 | 4 | 0.000000638568 |
| Solanum tuberosum | ST4.03ch10 | 5 | CH_stu_388 | 4 | 4 | 0.000000638568 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_449 | 4 | 5 | 0.00000318778 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_532 | 4 | 7 | 0.0000222439 |
| Solanum tuberosum | ST4.03ch00 | 5 | CH_stu_58 | 9 | 11 | 8.57595e-19 |
| Acer truncatum | chr5 | 6 | CH_acertr_370 | 3 | 3 | 0.00000123008 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 6 | CH_amhyb_476 | 2 | 2 | 0.000841751 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_202 | 9 | 45 | 8.33523e-18 |
| Fragaria x ananassa | Fvb4-2 | 6 | CH_fan_153 | 5 | 10 | 0.0000000000445705 |
| Medicago truncatula | chr3 | 6 | CH_mtr_196 | 8 | 38 | 0.000000000000031642 |
| Medicago truncatula | chr7 | 6 | CH_mtr_805 | 3 | 3 | 0.00000658367 |
| Medicago truncatula | chr6 | 6 | CH_mtr_806 | 3 | 3 | 0.00000658367 |
| Physcomitrium patens | Chr23 | 6 | CH_ppa_96 | 3 | 6 | 0.00000630472 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_314 | 3 | 5 | 0.0000034276 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_911 | 3 | 6 | 0.0000216806 |
| Sechium edule | LG10 | 6 | CH_sed_365 | 3 | 6 | 0.000124436 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_937 | 3 | 3 | 0.0000000142393 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_25 | 12 | 14 | 3.6441e-26 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_3 | 17 | 18 | 1.97037e-40 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_62 | 11 | 28 | 4.12679e-18 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_80 | 12 | 54 | 1.27435e-16 |
| Solanum lycopersicum | SL4.0ch11 | 6 | CH_sly_9 | 22 | 77 | 1.87445e-36 |
| Solanum pennellii | Spenn-ch11 | 6 | CH_spe_392 | 4 | 24 | 0.00000279693 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_109 | 7 | 7 | 0.00000000000000453229 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_123 | 10 | 42 | 0.0000000000000397224 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_209 | 8 | 35 | 0.00000000019077 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_272 | 5 | 6 | 0.0000000074494 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_387 | 4 | 4 | 0.000000638568 |
| Solanum tuberosum | ST4.03ch10 | 6 | CH_stu_388 | 4 | 4 | 0.000000638568 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_449 | 4 | 5 | 0.00000318778 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_532 | 4 | 7 | 0.0000222439 |
| Solanum tuberosum | ST4.03ch00 | 6 | CH_stu_58 | 9 | 11 | 8.57595e-19 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |