Functional clusters
Information
- Type InterPro
- Description Stress-induced protein KIN1/KIN2
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 5 | CH_acertr_376 | 4 | 22 | 0.00000160884 |
| Acer truncatum | chr4 | 5 | CH_acertr_653 | 3 | 9 | 0.0000750472 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_643 | 2 | 2 | 0.000802177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00039 | 5 | CH_atr_408 | 2 | 2 | 0.0000794407 |
| Brassica carinata | ChrC02 | 5 | CH_bca_258 | 4 | 4 | 0.000000000311394 |
| Brassica oleracea | C8 | 5 | CH_bol_320 | 3 | 3 | 0.000000729184 |
| Capsicum annuum | PGAv.1.6.scaffold497 | 5 | CH_can_860 | 2 | 2 | 0.000826105 |
| Cicer arietinum L. | Ca_LG6_v3 | 5 | CH_car_365 | 2 | 2 | 0.000466981 |
| Coffea canephora | chr3 | 5 | CH_ccan_15 | 6 | 45 | 2.37152e-16 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_248 | 3 | 3 | 0.000000301137 |
| Carya illinoinensis | Chr04 | 5 | CH_cil_762 | 2 | 2 | 0.000371897 |
| Carica papaya | supercontig_188 | 5 | CH_cpa_387 | 2 | 2 | 0.0000950661 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1710 | 5 | CH_cqu_946 | 2 | 2 | 0.000473821 |
| Cucumis sativus L. | chr5 | 5 | CH_csa_209 | 3 | 3 | 0.000000365847 |
| Durio zibethinus | NW_019167938.1 | 5 | CH_dzi_123 | 4 | 5 | 0.00000000106773 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_385 | 3 | 11 | 0.000000858749 |
| Gossypium hirsutum | A11 | 5 | CH_ghi_1285 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D11 | 5 | CH_ghi_1286 | 2 | 2 | 0.000747644 |
| Glycine max | Gm13 | 5 | CH_gma_356 | 3 | 3 | 0.000000259319 |
| Glycine max | Gm18 | 5 | CH_gma_509 | 3 | 8 | 0.0000145133 |
| Gossypium raimondii | Chr07 | 5 | CH_gra_578 | 2 | 2 | 0.000321664 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_409 | 3 | 5 | 0.000000792497 |
| Magnolia biondii | Chr10 | 5 | CH_mbi_184 | 4 | 4 | 0.0000000000257743 |
| Malus domestica | Chr17 | 5 | CH_mdo_783 | 3 | 10 | 0.0000217273 |
| Medicago truncatula | chr6 | 5 | CH_mtr_36 | 10 | 11 | 5.06164e-31 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_74 | 4 | 4 | 0.00000000000502957 |
| Petunia axillaris | Peaxi162Scf00479 | 5 | CH_pax_154 | 4 | 9 | 0.0000000276192 |
| Prunus persica | Pp03 | 5 | CH_ppe_53 | 8 | 14 | 5.47227e-22 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_122 | 5 | 17 | 0.000000000441247 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_335 | 4 | 27 | 0.00000531742 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_699 | 3 | 15 | 0.000529734 |
| Papaver somniferum | NC_039362.1 | 5 | CH_pso_838 | 3 | 7 | 0.0000410095 |
| Papaver somniferum | NW_020622270.1 | 5 | CH_pso_927 | 3 | 9 | 0.000098389 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_994 | 3 | 10 | 0.000140532 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_200 | 4 | 4 | 0.000000000414239 |
| Populus trichocarpa | Chr04 | 5 | CH_ptr_78 | 6 | 6 | 2.49155e-17 |
| Phaseolus vulgaris | Chr08 | 5 | CH_pvu_390 | 3 | 7 | 0.0000237879 |
| Phaseolus vulgaris | Chr04 | 5 | CH_pvu_84 | 5 | 5 | 0.0000000000000275443 |
| Quercus lobata | 6 | 5 | CH_qlo_555 | 4 | 4 | 0.000000000563593 |
| Quercus lobata | CM012294 | 5 | CH_qlo_84 | 9 | 11 | 1.97062e-26 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_236 | 5 | 15 | 0.000000000000341224 |
| Rhododendron simsii | chr08 | 5 | CH_rsi_816 | 2 | 2 | 0.000193592 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_328 | 3 | 3 | 0.00000037262 |
| Salix brachista | GWHAAZH00000004 | 5 | CH_sbr_245 | 4 | 14 | 0.000000094535 |
| Simmondsia chinensis | GWHAASQ00000011 | 5 | CH_sci_467 | 2 | 2 | 0.000510856 |
| Sechium edule | LG03 | 5 | CH_sed_217 | 3 | 3 | 0.00000167965 |
| Solanum lycopersicum | SL4.0ch02 | 5 | CH_sly_388 | 3 | 3 | 0.00000113688 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_156 | 3 | 3 | 0.0000000129529 |
| Vanilla planifolia | CM028152.1 | 5 | CH_vpl_429 | 2 | 2 | 0.000073888 |
| Acer truncatum | chr1 | 6 | CH_acertr_376 | 4 | 22 | 0.00000160884 |
| Acer truncatum | chr4 | 6 | CH_acertr_653 | 3 | 9 | 0.0000750472 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_643 | 2 | 2 | 0.000802177 |
| Amborella trichopoda | AmTr_v1.0_scaffold00039 | 6 | CH_atr_408 | 2 | 2 | 0.0000794407 |
| Brassica carinata | ChrC02 | 6 | CH_bca_258 | 4 | 4 | 0.000000000311394 |
| Brassica oleracea | C8 | 6 | CH_bol_320 | 3 | 3 | 0.000000729184 |
| Capsicum annuum | PGAv.1.6.scaffold497 | 6 | CH_can_860 | 2 | 2 | 0.000826105 |
| Cicer arietinum L. | Ca_LG6_v3 | 6 | CH_car_365 | 2 | 2 | 0.000466981 |
| Coffea canephora | chr3 | 6 | CH_ccan_15 | 6 | 45 | 2.37152e-16 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_248 | 3 | 3 | 0.000000301137 |
| Carya illinoinensis | Chr04 | 6 | CH_cil_762 | 2 | 2 | 0.000371897 |
| Cucumis melo | chr09 | 6 | CH_cme_90 | 4 | 4 | 0.0000000000623531 |
| Carica papaya | supercontig_188 | 6 | CH_cpa_387 | 2 | 2 | 0.0000950661 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1710 | 6 | CH_cqu_946 | 2 | 2 | 0.000473821 |
| Cucumis sativus L. | chr5 | 6 | CH_csa_209 | 3 | 3 | 0.000000365847 |
| Durio zibethinus | NW_019167938.1 | 6 | CH_dzi_123 | 4 | 5 | 0.00000000106773 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_264 | 4 | 15 | 0.0000000185344 |
| Fragaria x ananassa | Fvb6-4 | 6 | CH_fan_677 | 3 | 10 | 0.0000176164 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_385 | 3 | 11 | 0.000000858749 |
| Gossypium hirsutum | A11 | 6 | CH_ghi_1285 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D11 | 6 | CH_ghi_1286 | 2 | 2 | 0.000747644 |
| Glycine max | Gm13 | 6 | CH_gma_356 | 3 | 3 | 0.000000259319 |
| Glycine max | Gm18 | 6 | CH_gma_509 | 3 | 8 | 0.0000145133 |
| Gossypium raimondii | Chr07 | 6 | CH_gra_578 | 2 | 2 | 0.000321664 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_409 | 3 | 5 | 0.000000792497 |
| Magnolia biondii | Chr10 | 6 | CH_mbi_184 | 4 | 4 | 0.0000000000257743 |
| Malus domestica | Chr17 | 6 | CH_mdo_783 | 3 | 10 | 0.0000217273 |
| Medicago truncatula | chr6 | 6 | CH_mtr_36 | 10 | 11 | 5.06164e-31 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_74 | 4 | 4 | 0.00000000000502957 |
| Petunia axillaris | Peaxi162Scf00479 | 6 | CH_pax_154 | 4 | 9 | 0.0000000276192 |
| Prunus persica | Pp03 | 6 | CH_ppe_53 | 8 | 14 | 5.47227e-22 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_122 | 5 | 17 | 0.000000000441247 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_335 | 4 | 27 | 0.00000531742 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_699 | 3 | 15 | 0.000529734 |
| Papaver somniferum | NC_039362.1 | 6 | CH_pso_838 | 3 | 7 | 0.0000410095 |
| Papaver somniferum | NW_020622270.1 | 6 | CH_pso_927 | 3 | 9 | 0.000098389 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_994 | 3 | 10 | 0.000140532 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_200 | 4 | 4 | 0.000000000414239 |
| Populus trichocarpa | Chr04 | 6 | CH_ptr_78 | 6 | 6 | 2.49155e-17 |
| Phaseolus vulgaris | Chr08 | 6 | CH_pvu_390 | 3 | 7 | 0.0000237879 |
| Phaseolus vulgaris | Chr04 | 6 | CH_pvu_84 | 5 | 5 | 0.0000000000000275443 |
| Quercus lobata | 6 | 6 | CH_qlo_555 | 4 | 4 | 0.000000000563593 |
| Quercus lobata | CM012294 | 6 | CH_qlo_84 | 9 | 11 | 1.97062e-26 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_236 | 5 | 15 | 0.000000000000341224 |
| Rhododendron simsii | chr08 | 6 | CH_rsi_816 | 2 | 2 | 0.000193592 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_328 | 3 | 3 | 0.00000037262 |
| Salix brachista | GWHAAZH00000004 | 6 | CH_sbr_245 | 4 | 14 | 0.000000094535 |
| Simmondsia chinensis | GWHAASQ00000011 | 6 | CH_sci_467 | 2 | 2 | 0.000510856 |
| Sechium edule | LG03 | 6 | CH_sed_217 | 3 | 3 | 0.00000167965 |
| Solanum lycopersicum | SL4.0ch02 | 6 | CH_sly_388 | 3 | 3 | 0.00000113688 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_156 | 3 | 3 | 0.0000000129529 |
| Vanilla planifolia | CM028152.1 | 6 | CH_vpl_429 | 2 | 2 | 0.000073888 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |