Functional clusters
Information
- Type InterPro
- Description VQ motif-containing protein 29
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_182 | 3 | 3 | 0.00000000302034 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_595 | 3 | 3 | 0.00000000513834 |
| Erythranthe guttata | scaffold_12 | 5 | CH_egut_606 | 2 | 2 | 0.000218444 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_162 | 4 | 7 | 0.0000000000142592 |
| Malus domestica | Chr02 | 5 | CH_mdo_835 | 2 | 2 | 0.0000379212 |
| Medicago truncatula | chr4 | 5 | CH_mtr_458 | 3 | 3 | 0.0000000101287 |
| Prunus persica | Pp06 | 5 | CH_ppe_608 | 2 | 2 | 0.0000745962 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_815 | 2 | 2 | 0.000193592 |
| Solanum lycopersicum | SL4.0ch09 | 5 | CH_sly_265 | 3 | 3 | 0.0000000206706 |
| Solanum pennellii | Spenn-ch09 | 5 | CH_spe_221 | 3 | 3 | 0.0000000118706 |
| Solanum tuberosum | ST4.03ch09 | 5 | CH_stu_296 | 3 | 3 | 0.0000000157569 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 5 | CH_tpr_162 | 3 | 3 | 0.00000000859546 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_182 | 3 | 3 | 0.00000000302034 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_595 | 3 | 3 | 0.00000000513834 |
| Erythranthe guttata | scaffold_12 | 6 | CH_egut_606 | 2 | 2 | 0.000218444 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_162 | 4 | 7 | 0.0000000000142592 |
| Malus domestica | Chr02 | 6 | CH_mdo_835 | 2 | 2 | 0.0000379212 |
| Medicago truncatula | chr4 | 6 | CH_mtr_458 | 3 | 3 | 0.0000000101287 |
| Prunus persica | Pp06 | 6 | CH_ppe_608 | 2 | 2 | 0.0000745962 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_815 | 2 | 2 | 0.000193592 |
| Solanum lycopersicum | SL4.0ch09 | 6 | CH_sly_265 | 3 | 3 | 0.0000000206706 |
| Solanum pennellii | Spenn-ch09 | 6 | CH_spe_221 | 3 | 3 | 0.0000000118706 |
| Solanum tuberosum | ST4.03ch09 | 6 | CH_stu_296 | 3 | 3 | 0.0000000157569 |
| Trifolium pratense | Tp57577_TGAC_v2_LG5 | 6 | CH_tpr_162 | 3 | 3 | 0.00000000859546 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |