Functional clusters
Information
- Type InterPro
- Description Protein time for coffee
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_784 | 2 | 2 | 0.000211491 |
| Actinidia chinensis | Lachesis_group10 | 5 | CH_ach_49 | 4 | 5 | 0.0000000001683 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 5 | CH_amhyb_78 | 3 | 3 | 0.0000000106286 |
| Daucus carota | DCARv2_Chr8 | 5 | CH_dca_436 | 2 | 2 | 0.0000637775 |
| Gossypium hirsutum | A12 | 5 | CH_ghi_1217 | 2 | 2 | 0.000560733 |
| Helianthus annuus | HanXRQChr04 | 5 | CH_han_816 | 2 | 2 | 0.0000386429 |
| Lonicera japonica | GWHAAZE00000006 | 5 | CH_lonja_661 | 3 | 29 | 0.0000196429 |
| Physcomitrium patens | Chr20 | 5 | CH_ppa_13 | 5 | 12 | 0.0000000000210791 |
| Physcomitrium patens | Chr10 | 5 | CH_ppa_9 | 5 | 8 | 0.00000000000149138 |
| Salvia bowleyana | GWHASIU00000008 | 5 | CH_sbo_588 | 2 | 2 | 0.000136494 |
| Trochodendron aralioides | group16 | 5 | CH_tar_276 | 3 | 3 | 0.000000189236 |
| Vanilla planifolia | CM028162.1 | 5 | CH_vpl_146 | 3 | 3 | 0.000000163789 |
| Acer truncatum | chr4 | 6 | CH_acertr_784 | 2 | 2 | 0.000211491 |
| Actinidia chinensis | Lachesis_group10 | 6 | CH_ach_49 | 4 | 5 | 0.0000000001683 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 6 | CH_amhyb_78 | 3 | 3 | 0.0000000106286 |
| Daucus carota | DCARv2_Chr8 | 6 | CH_dca_436 | 2 | 2 | 0.0000637775 |
| Gossypium hirsutum | A12 | 6 | CH_ghi_1217 | 2 | 2 | 0.000560733 |
| Helianthus annuus | HanXRQChr04 | 6 | CH_han_816 | 2 | 2 | 0.0000386429 |
| Lonicera japonica | GWHAAZE00000006 | 6 | CH_lonja_661 | 3 | 29 | 0.0000196429 |
| Physcomitrium patens | Chr20 | 6 | CH_ppa_13 | 5 | 12 | 0.0000000000210791 |
| Physcomitrium patens | Chr10 | 6 | CH_ppa_9 | 5 | 8 | 0.00000000000149138 |
| Salvia bowleyana | GWHASIU00000008 | 6 | CH_sbo_588 | 2 | 2 | 0.000136494 |
| Trochodendron aralioides | group16 | 6 | CH_tar_276 | 3 | 3 | 0.000000189236 |
| Vanilla planifolia | CM028162.1 | 6 | CH_vpl_146 | 3 | 3 | 0.000000163789 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |