Functional clusters

Information

  • Type InterPro
  • Description GPI-anchored protein LORELEI-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_102840_HRSCAF_103099 5 CH_ama_240 2 2 0.000862218
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_483 2 2 0.00049675
Camellia sinensis var. sinensis Chr5 5 CH_camsi_1357 2 2 0.000458547
Capsicum annuum PGAv.1.6.scaffold623 5 CH_can_795 2 2 0.000495663
Cardamine hirsuta Chr8 5 CH_chi_269 3 3 0.000000143334
Eutrema salsugineum scaffold_16 5 CH_esa_189 3 3 0.000000304449
Glycine max Gm04 5 CH_gma_883 2 2 0.000569336
Glycine max Gm06 5 CH_gma_884 2 2 0.000569336
Helianthus annuus HanXRQChr11 5 CH_han_1083 2 2 0.000386429
Lupinus albus Lalb_Chr03 5 CH_lal_778 2 2 0.000787236
Magnolia biondii Chr15 5 CH_mbi_934 2 2 0.000145698
Nelumbo nucifera chr6 5 CH_nnu_236 3 6 0.000000695966
Oryza sativa ssp. japonica chr04 5 CH_osa_759 2 2 0.000792184
Physcomitrium patens Chr04 5 CH_ppa_427 2 2 0.000919089
Papaver somniferum NC_039364.1 5 CH_pso_1212 2 2 0.000630822
Papaver somniferum NC_039365.1 5 CH_pso_198 4 4 0.00000000000240149
Quercus lobata 8 5 CH_qlo_1604 2 2 0.000309773
Rhododendron simsii chr06 5 CH_rsi_863 2 4 0.000387159
Sechium edule LG04 5 CH_sed_163 3 3 0.000000152696
Sequoiadendron giganteum chr7 5 CH_sgi_1835 2 2 0.0000487151
Vanilla planifolia CM028158.1 5 CH_vpl_629 2 2 0.000443328
Vanilla planifolia JADCNL010000082.1 5 CH_vpl_630 2 2 0.000443328
Avicennia marina ScioBoG_102840_HRSCAF_103099 6 CH_ama_240 2 2 0.000862218
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_483 2 2 0.00049675
Camellia sinensis var. sinensis Chr5 6 CH_camsi_1357 2 2 0.000458547
Capsicum annuum PGAv.1.6.scaffold623 6 CH_can_795 2 2 0.000495663
Cardamine hirsuta Chr8 6 CH_chi_269 3 3 0.000000143334
Cucumis melo chr01 6 CH_cme_385 2 2 0.000200133
Eutrema salsugineum scaffold_16 6 CH_esa_189 3 3 0.000000304449
Glycine max Gm04 6 CH_gma_883 2 2 0.000569336
Glycine max Gm06 6 CH_gma_884 2 2 0.000569336
Helianthus annuus HanXRQChr11 6 CH_han_1083 2 2 0.000386429
Lupinus albus Lalb_Chr03 6 CH_lal_778 2 2 0.000787236
Magnolia biondii Chr15 6 CH_mbi_934 2 2 0.000145698
Nelumbo nucifera chr6 6 CH_nnu_236 3 6 0.000000695966
Oryza sativa ssp. japonica chr04 6 CH_osa_759 2 2 0.000792184
Physcomitrium patens Chr04 6 CH_ppa_427 2 2 0.000919089
Papaver somniferum NC_039364.1 6 CH_pso_1212 2 2 0.000630822
Papaver somniferum NC_039365.1 6 CH_pso_198 4 4 0.00000000000240149
Quercus lobata 8 6 CH_qlo_1604 2 2 0.000309773
Rhododendron simsii chr06 6 CH_rsi_863 2 4 0.000387159
Sechium edule LG04 6 CH_sed_163 3 3 0.000000152696
Sequoiadendron giganteum chr7 6 CH_sgi_1835 2 2 0.0000487151
Vanilla planifolia CM028158.1 6 CH_vpl_629 2 2 0.000443328
Vanilla planifolia JADCNL010000082.1 6 CH_vpl_630 2 2 0.000443328

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001