Functional clusters

Information

  • Type InterPro
  • Description Arabinogalactan protein 3/12/13/14/21

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG2_v3 5 CH_car_307 2 2 0.00023349
Gossypium hirsutum A11 5 CH_ghi_1139 2 2 0.000400523
Gossypium hirsutum D11 5 CH_ghi_1140 2 2 0.000400523
Gossypium raimondii Chr07 5 CH_gra_485 2 3 0.000160828
Medicago truncatula chr6 5 CH_mtr_1381 2 4 0.000739503
Papaver somniferum NC_039366.1 5 CH_pso_108 5 5 2.43477e-16
Papaver somniferum NC_039368.1 5 CH_pso_238 4 5 0.0000000000216122
Cicer arietinum L. Ca_LG2_v3 6 CH_car_307 2 2 0.00023349
Gossypium hirsutum A11 6 CH_ghi_1139 2 2 0.000400523
Gossypium hirsutum D11 6 CH_ghi_1140 2 2 0.000400523
Gossypium raimondii Chr07 6 CH_gra_485 2 3 0.000160828
Medicago truncatula chr6 6 CH_mtr_1381 2 4 0.000739503
Papaver somniferum NC_039366.1 6 CH_pso_108 5 5 2.43477e-16
Papaver somniferum NC_039368.1 6 CH_pso_238 4 5 0.0000000000216122

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001