Functional clusters

Information

  • Type InterPro
  • Description Flowering-promoting factor 1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 5 CH_acertr_911 2 2 0.000422982
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 5 CH_amhyb_333 2 2 0.000252525
Brassica carinata ChrC06 5 CH_bca_902 3 5 0.00000311806
Brassica napus C09 5 CH_bna_375 5 47 0.0000000210629
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_482 2 2 0.00049675
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1432 2 2 0.000687821
Capsicum annuum PGAv.1.6.scaffold129 5 CH_can_761 2 4 0.000495622
Coffea canephora chr0 5 CH_ccan_383 2 2 0.0000425891
Daucus carota DCARv2_Chr1 5 CH_dca_282 3 4 0.00000204976
Helianthus annuus HanXRQChr17 5 CH_han_214 4 4 0.0000000000121186
Lactuca sativa Lsat_1_v8_lg_5 5 CH_lsa_487 3 10 0.00000475364
Nelumbo nucifera chr4 5 CH_nnu_90 4 4 0.0000000000704139
Olea europaea chr4 5 CH_oeu_687 2 2 0.000800683
Punica granatum NC_045131.1 5 CH_pgr_239 3 3 0.000000295604
Quercus lobata 12 5 CH_qlo_1603 2 2 0.000309773
Rhododendron simsii chr04 5 CH_rsi_390 3 3 0.0000000624652
Rhododendron simsii chr13 5 CH_rsi_977 2 2 0.000645307
Salvia bowleyana GWHASIU00000007 5 CH_sbo_587 2 2 0.000136494
Simmondsia chinensis GWHAASQ00000019 5 CH_sci_530 2 2 0.000851426
Solanum lycopersicum SL4.0ch01 5 CH_sly_284 3 3 0.0000000516764
Solanum pennellii Spenn-ch01 5 CH_spe_109 4 6 0.000000000019799
Solanum tuberosum ST4.03ch01 5 CH_stu_794 2 2 0.000307472
Trifolium pratense Tp57577_TGAC_v2_LG4 5 CH_tpr_777 2 2 0.000756974
Vanilla planifolia CM028163.1 5 CH_vpl_426 2 2 0.000073888
Acer truncatum chr7 6 CH_acertr_911 2 2 0.000422982
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 6 CH_amhyb_333 2 2 0.000252525
Brassica carinata ChrC06 6 CH_bca_902 3 5 0.00000311806
Brassica napus C09 6 CH_bna_375 5 47 0.0000000210629
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_482 2 2 0.00049675
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1432 2 2 0.000687821
Capsicum annuum PGAv.1.6.scaffold129 6 CH_can_761 2 4 0.000495622
Coffea canephora chr0 6 CH_ccan_383 2 2 0.0000425891
Daucus carota DCARv2_Chr1 6 CH_dca_282 3 4 0.00000204976
Helianthus annuus HanXRQChr17 6 CH_han_214 4 4 0.0000000000121186
Lactuca sativa Lsat_1_v8_lg_5 6 CH_lsa_487 3 10 0.00000475364
Nelumbo nucifera chr4 6 CH_nnu_90 4 4 0.0000000000704139
Olea europaea chr4 6 CH_oeu_687 2 2 0.000800683
Punica granatum NC_045131.1 6 CH_pgr_239 3 3 0.000000295604
Quercus lobata 12 6 CH_qlo_1603 2 2 0.000309773
Rhododendron simsii chr04 6 CH_rsi_390 3 3 0.0000000624652
Rhododendron simsii chr13 6 CH_rsi_977 2 2 0.000645307
Salvia bowleyana GWHASIU00000007 6 CH_sbo_587 2 2 0.000136494
Simmondsia chinensis GWHAASQ00000019 6 CH_sci_530 2 2 0.000851426
Solanum lycopersicum SL4.0ch01 6 CH_sly_284 3 3 0.0000000516764
Solanum pennellii Spenn-ch01 6 CH_spe_109 4 6 0.000000000019799
Solanum tuberosum ST4.03ch01 6 CH_stu_794 2 2 0.000307472
Trifolium pratense Tp57577_TGAC_v2_LG4 6 CH_tpr_777 2 2 0.000756974
Vanilla planifolia CM028163.1 6 CH_vpl_426 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001