Functional clusters
Information
- Type InterPro
- Description Protein RALF-like 27
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC03 | 5 | CH_bca_1775 | 2 | 2 | 0.000448905 |
| Brassica carinata | ChrC03 | 5 | CH_bca_1776 | 2 | 2 | 0.000448905 |
| Brassica napus | A02 | 5 | CH_bna_1496 | 2 | 2 | 0.000835275 |
| Brassica napus | C02 | 5 | CH_bna_1497 | 2 | 2 | 0.000835275 |
| Brassica napus | C02 | 5 | CH_bna_177 | 4 | 5 | 0.0000000000201442 |
| Brassica oleracea | C2 | 5 | CH_bol_213 | 3 | 3 | 0.0000000320521 |
| Brassica oleracea | C2 | 5 | CH_bol_769 | 2 | 2 | 0.000490292 |
| Erythranthe guttata | scaffold_8 | 5 | CH_egut_578 | 2 | 2 | 0.000218444 |
| Gossypium hirsutum | D07 | 5 | CH_ghi_223 | 4 | 4 | 0.00000000000199902 |
| Gossypium hirsutum | A07 | 5 | CH_ghi_427 | 3 | 3 | 0.0000000374316 |
| Gossypium raimondii | Chr01 | 5 | CH_gra_118 | 4 | 4 | 0.000000000000462285 |
| Manihot esculenta | Chromosome01 | 5 | CH_mes_260 | 3 | 4 | 0.0000000223722 |
| Olea europaea | scaffold126 | 5 | CH_oeu_88 | 3 | 3 | 0.00000000427407 |
| Populus trichocarpa | Chr17 | 5 | CH_ptr_117 | 5 | 13 | 0.000000000000107728 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1392 | 2 | 3 | 0.000154883 |
| Solanum pennellii | Spenn-ch02 | 5 | CH_spe_219 | 3 | 3 | 0.0000000118706 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_767 | 2 | 2 | 0.000307472 |
| Solanum tuberosum | ST4.03ch02 | 5 | CH_stu_768 | 2 | 2 | 0.000307472 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_243 | 3 | 3 | 0.00000000804614 |
| Brassica carinata | ChrC03 | 6 | CH_bca_1775 | 2 | 2 | 0.000448905 |
| Brassica carinata | ChrC03 | 6 | CH_bca_1776 | 2 | 2 | 0.000448905 |
| Brassica napus | A02 | 6 | CH_bna_1496 | 2 | 2 | 0.000835275 |
| Brassica napus | C02 | 6 | CH_bna_1497 | 2 | 2 | 0.000835275 |
| Brassica napus | C02 | 6 | CH_bna_177 | 4 | 5 | 0.0000000000201442 |
| Brassica oleracea | C2 | 6 | CH_bol_213 | 3 | 3 | 0.0000000320521 |
| Brassica oleracea | C2 | 6 | CH_bol_769 | 2 | 2 | 0.000490292 |
| Erythranthe guttata | scaffold_8 | 6 | CH_egut_578 | 2 | 2 | 0.000218444 |
| Gossypium hirsutum | D07 | 6 | CH_ghi_223 | 4 | 4 | 0.00000000000199902 |
| Gossypium hirsutum | A07 | 6 | CH_ghi_427 | 3 | 3 | 0.0000000374316 |
| Gossypium raimondii | Chr01 | 6 | CH_gra_118 | 4 | 4 | 0.000000000000462285 |
| Manihot esculenta | Chromosome01 | 6 | CH_mes_260 | 3 | 4 | 0.0000000223722 |
| Olea europaea | scaffold126 | 6 | CH_oeu_88 | 3 | 3 | 0.00000000427407 |
| Populus trichocarpa | Chr17 | 6 | CH_ptr_117 | 5 | 13 | 0.000000000000107728 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1392 | 2 | 3 | 0.000154883 |
| Solanum pennellii | Spenn-ch02 | 6 | CH_spe_219 | 3 | 3 | 0.0000000118706 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_767 | 2 | 2 | 0.000307472 |
| Solanum tuberosum | ST4.03ch02 | 6 | CH_stu_768 | 2 | 2 | 0.000307472 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_243 | 3 | 3 | 0.00000000804614 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |