Functional clusters

Information

  • Type InterPro
  • Description Disease resistance protein, RPW8-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 5 CH_aar_398 2 2 0.000547395
Arabidopsis lyrata scaffold_5 5 CH_aly_107 4 4 0.0000000000301961
Arabidopsis lyrata scaffold_8 5 CH_aly_240 3 3 0.000000228728
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 5 CH_arhy_232 5 10 0.000000000000701226
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 5 CH_arhy_273 5 15 0.00000000000835252
Arabidopsis thaliana Chr3 5 CH_ath_128 4 10 0.000000000518367
Arabidopsis thaliana Chr5 5 CH_ath_194 3 3 0.0000000430914
Brassica carinata ChrC06 5 CH_bca_1186 3 5 0.0000307958
Brassica carinata ChrB04 5 CH_bca_293 4 4 0.000000000922079
Brassica carinata ChrB01 5 CH_bca_895 3 3 0.00000308103
Brassica napus C09 5 CH_bna_134 6 16 0.000000000000920665
Brassica napus C07 5 CH_bna_208 5 10 0.0000000000976741
Brassica napus A09 5 CH_bna_372 4 6 0.0000000189974
Brassica oleracea C9 5 CH_bol_127 4 4 0.000000000507607
Brassica oleracea C7 5 CH_bol_195 4 7 0.0000000177542
Brassica oleracea C2 5 CH_bol_357 3 3 0.00000182697
Brassica oleracea C2 5 CH_bol_358 3 3 0.00000182697
Brassica rapa A06 5 CH_bra_267 3 4 0.00000619152
Camellia sinensis var. sinensis Chr1 5 CH_camsi_364 4 19 0.00000000560259
Cannabis sativa NC_044373.1 5 CH_cansat_442 2 3 0.000196986
Capsicum annuum PGAv.1.6.scaffold836 5 CH_can_717 2 2 0.000247831
Cicer arietinum L. Ca_LG7_v3 5 CH_car_60 3 3 0.0000000363466
Corylus avellana 11 5 CH_cav_66 5 9 0.0000000000000326554
Carpinus fangiana Cfa01 5 CH_cfa_84 5 8 0.0000000000000829061
Cardamine hirsuta Chr6 5 CH_chi_147 4 4 0.000000000124841
Carya illinoinensis Chr01 5 CH_cil_10 14 20 3.1903e-39
Carica papaya supercontig_6 5 CH_cpa_102 3 3 0.000000013557
Capsella rubella scaffold_8 5 CH_cru_603 2 2 0.000438693
Capsella rubella scaffold_5 5 CH_cru_604 2 2 0.000438693
Daucus carota DCARv2_Chr6 5 CH_dca_255 3 4 0.000000854109
Durio zibethinus NW_019168048.1 5 CH_dzi_545 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_434 3 7 0.00000887543
Eucalyptus grandis Chr09 5 CH_egr_396 4 4 0.00000000000300752
Eutrema salsugineum scaffold_6 5 CH_esa_169 3 3 0.0000000869853
Fragaria vesca Fvb6 5 CH_fve_112 8 25 0.0000000000013564
Fragaria vesca Fvb5 5 CH_fve_597 3 3 0.000152321
Fragaria vesca Fvb6 5 CH_fve_598 3 3 0.000152321
Glycine max Gm05 5 CH_gma_404 3 3 0.00000121016
Glycine max Gm17 5 CH_gma_71 6 10 0.00000000000000297905
Helianthus annuus HanXRQChr07 5 CH_han_91 6 6 5.26132e-17
Lupinus albus Lalb_Chr05 5 CH_lal_143 4 12 0.00000000750862
Lotus japonicus chr4 5 CH_lja_36 5 5 0.00000000000000411894
Lonicera japonica GWHAAZE00000007 5 CH_lonja_10 17 27 1.43244e-48
Lonicera japonica GWHAAZE00000004 5 CH_lonja_609 3 3 0.0000061331
Lactuca sativa Lsat_1_v8_lg_2 5 CH_lsa_417 3 3 0.000000871892
Malus domestica Chr15 5 CH_mdo_15 12 18 1.26525e-30
Malus domestica Chr02 5 CH_mdo_5 17 26 2.66341e-45
Malus domestica Chr15 5 CH_mdo_763 3 3 0.0000154014
Medicago truncatula chr5 5 CH_mtr_219 6 12 0.000000000000181325
Medicago truncatula chr8 5 CH_mtr_58 11 38 4.51228e-25
Medicago truncatula chr7 5 CH_mtr_774 3 3 0.00000389956
Nelumbo nucifera chr6 5 CH_nnu_220 3 3 0.000000292352
Olea europaea chr4 5 CH_oeu_597 2 3 0.000480389
Punica granatum NC_045129.1 5 CH_pgr_53 5 6 0.0000000000000014268
Prunus persica Pp05 5 CH_ppe_271 4 4 0.00000000603413
Prunus persica Pp07 5 CH_ppe_7 16 22 2.85279e-45
Pisum sativum chr4LG4 5 CH_psa_60 5 7 0.0000000000000069972
Populus trichocarpa Chr07 5 CH_ptr_70 6 7 7.11418e-19
Phaseolus vulgaris Chr03 5 CH_pvu_39 7 7 4.46219e-22
Quercus lobata 6 5 CH_qlo_12 19 24 1.07345e-49
Quercus lobata 9 5 CH_qlo_417 9 71 0.00000000000289065
Quercus lobata 1 5 CH_qlo_439 7 22 0.000000000008097
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1072 4 17 0.000111925
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_2 28 65 1.43036e-65
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_789 4 8 0.00000331481
Rhododendron simsii chr08 5 CH_rsi_814 2 2 0.000193592
Salix brachista GWHAAZH00000007 5 CH_sbr_17 9 9 3.52696e-30
Sequoiadendron giganteum chr6 5 CH_sgi_12 26 56 3.54368e-49
Sequoiadendron giganteum chr8 5 CH_sgi_1946 4 8 0.00011514
Sequoiadendron giganteum chr6 5 CH_sgi_2517 3 3 0.000667326
Sequoiadendron giganteum chr6 5 CH_sgi_3 30 45 2.40996e-64
Sequoiadendron giganteum chr11 5 CH_sgi_52 15 15 1.8875e-35
Sequoiadendron giganteum chr1 5 CH_sgi_680 6 8 0.000000000277074
Schrenkiella parvula ch2-4 5 CH_spa_83 3 3 0.00000000929892
Trifolium pratense Tp57577_TGAC_v2_scaf_459 5 CH_tpr_16 7 7 5.08779e-20
Trifolium pratense Tp57577_TGAC_v2_LG3 5 CH_tpr_315 3 3 0.00000312875
Trifolium pratense Tp57577_TGAC_v2_scaf_342 5 CH_tpr_431 3 5 0.0000312656
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_489 2 2 0.0000929238
Vigna mungo CM024069.1 5 CH_vmu_42 5 8 0.000000000000153727
Vitis vinifera chr10 5 CH_vvi_206 4 4 0.00000000314245
Vitis vinifera chr7 5 CH_vvi_32 10 15 3.52752e-26
Aethionema arabicum LG-4 6 CH_aar_398 2 2 0.000547395
Arabidopsis lyrata scaffold_5 6 CH_aly_107 4 4 0.0000000000301961
Arabidopsis lyrata scaffold_8 6 CH_aly_240 3 3 0.000000228728
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.01 6 CH_arhy_232 5 10 0.000000000000701226
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 6 CH_arhy_273 5 15 0.00000000000835252
Arabidopsis thaliana Chr3 6 CH_ath_128 4 10 0.000000000518367
Arabidopsis thaliana Chr5 6 CH_ath_194 3 3 0.0000000430914
Brassica carinata ChrC06 6 CH_bca_1186 3 5 0.0000307958
Brassica carinata ChrB04 6 CH_bca_293 4 4 0.000000000922079
Brassica carinata ChrB01 6 CH_bca_895 3 3 0.00000308103
Brassica napus C09 6 CH_bna_134 6 16 0.000000000000920665
Brassica napus C07 6 CH_bna_208 5 10 0.0000000000976741
Brassica napus A09 6 CH_bna_372 4 6 0.0000000189974
Brassica oleracea C9 6 CH_bol_127 4 4 0.000000000507607
Brassica oleracea C7 6 CH_bol_195 4 7 0.0000000177542
Brassica oleracea C2 6 CH_bol_357 3 3 0.00000182697
Brassica oleracea C2 6 CH_bol_358 3 3 0.00000182697
Brassica rapa A06 6 CH_bra_267 3 4 0.00000619152
Camellia sinensis var. sinensis Chr1 6 CH_camsi_364 4 19 0.00000000560259
Cannabis sativa NC_044373.1 6 CH_cansat_442 2 3 0.000196986
Capsicum annuum PGAv.1.6.scaffold836 6 CH_can_717 2 2 0.000247831
Cicer arietinum L. Ca_LG7_v3 6 CH_car_60 3 3 0.0000000363466
Corylus avellana 11 6 CH_cav_66 5 9 0.0000000000000326554
Carpinus fangiana Cfa01 6 CH_cfa_84 5 8 0.0000000000000829061
Cardamine hirsuta Chr6 6 CH_chi_147 4 4 0.000000000124841
Carya illinoinensis Chr01 6 CH_cil_10 14 20 3.1903e-39
Carica papaya supercontig_6 6 CH_cpa_102 3 3 0.000000013557
Capsella rubella scaffold_8 6 CH_cru_603 2 2 0.000438693
Capsella rubella scaffold_5 6 CH_cru_604 2 2 0.000438693
Daucus carota DCARv2_Chr6 6 CH_dca_255 3 4 0.000000854109
Durio zibethinus NW_019168048.1 6 CH_dzi_545 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_434 3 7 0.00000887543
Eucalyptus grandis Chr09 6 CH_egr_396 4 4 0.00000000000300752
Eutrema salsugineum scaffold_6 6 CH_esa_169 3 3 0.0000000869853
Fragaria x ananassa Fvb6-4 6 CH_fan_1047 4 18 0.00044101
Fragaria x ananassa Fvb5-1 6 CH_fan_1093 3 4 0.000547889
Fragaria x ananassa Fvb1-2 6 CH_fan_112 7 15 0.00000000000106472
Fragaria x ananassa Fvb6-2 6 CH_fan_166 5 5 0.000000000153836
Fragaria x ananassa Fvb1-1 6 CH_fan_204 5 6 0.000000000922205
Fragaria x ananassa Fvb6-1 6 CH_fan_31 11 41 5.39635e-19
Fragaria x ananassa Fvb6-2 6 CH_fan_458 5 18 0.00000130306
Fragaria x ananassa Fvb1-1 6 CH_fan_573 4 7 0.0000050918
Fragaria x ananassa Fvb6-3 6 CH_fan_827 4 13 0.000103487
Fragaria vesca Fvb6 6 CH_fve_112 8 25 0.0000000000013564
Fragaria vesca Fvb5 6 CH_fve_597 3 3 0.000152321
Fragaria vesca Fvb6 6 CH_fve_598 3 3 0.000152321
Glycine max Gm05 6 CH_gma_404 3 3 0.00000121016
Glycine max Gm17 6 CH_gma_71 6 10 0.00000000000000297905
Helianthus annuus HanXRQChr07 6 CH_han_91 6 6 5.26132e-17
Lupinus albus Lalb_Chr05 6 CH_lal_143 4 12 0.00000000750862
Lotus japonicus chr4 6 CH_lja_36 5 5 0.00000000000000411894
Lonicera japonica GWHAAZE00000007 6 CH_lonja_10 17 27 1.43244e-48
Lonicera japonica GWHAAZE00000004 6 CH_lonja_609 3 3 0.0000061331
Lactuca sativa Lsat_1_v8_lg_2 6 CH_lsa_417 3 3 0.000000871892
Malus domestica Chr15 6 CH_mdo_15 12 18 1.26525e-30
Malus domestica Chr02 6 CH_mdo_5 17 26 2.66341e-45
Malus domestica Chr15 6 CH_mdo_763 3 3 0.0000154014
Medicago truncatula chr5 6 CH_mtr_219 6 12 0.000000000000181325
Medicago truncatula chr8 6 CH_mtr_58 11 38 4.51228e-25
Medicago truncatula chr7 6 CH_mtr_774 3 3 0.00000389956
Nelumbo nucifera chr6 6 CH_nnu_220 3 3 0.000000292352
Olea europaea chr4 6 CH_oeu_597 2 3 0.000480389
Punica granatum NC_045129.1 6 CH_pgr_53 5 6 0.0000000000000014268
Prunus persica Pp05 6 CH_ppe_271 4 4 0.00000000603413
Prunus persica Pp07 6 CH_ppe_7 16 22 2.85279e-45
Pisum sativum chr4LG4 6 CH_psa_60 5 7 0.0000000000000069972
Populus trichocarpa Chr07 6 CH_ptr_70 6 7 7.11418e-19
Phaseolus vulgaris Chr03 6 CH_pvu_39 7 7 4.46219e-22
Quercus lobata 6 6 CH_qlo_12 19 24 1.07345e-49
Quercus lobata 9 6 CH_qlo_417 9 71 0.00000000000289065
Quercus lobata 1 6 CH_qlo_439 7 22 0.000000000008097
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1072 4 17 0.000111925
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_2 28 65 1.43036e-65
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_789 4 8 0.00000331481
Rhododendron simsii chr08 6 CH_rsi_814 2 2 0.000193592
Salix brachista GWHAAZH00000007 6 CH_sbr_17 9 9 3.52696e-30
Sequoiadendron giganteum chr6 6 CH_sgi_12 26 56 3.54368e-49
Sequoiadendron giganteum chr8 6 CH_sgi_1946 4 8 0.00011514
Sequoiadendron giganteum chr6 6 CH_sgi_2517 3 3 0.000667326
Sequoiadendron giganteum chr6 6 CH_sgi_3 30 45 2.40996e-64
Sequoiadendron giganteum chr11 6 CH_sgi_52 15 15 1.8875e-35
Sequoiadendron giganteum chr1 6 CH_sgi_680 6 8 0.000000000277074
Schrenkiella parvula ch2-4 6 CH_spa_83 3 3 0.00000000929892
Trifolium pratense Tp57577_TGAC_v2_scaf_459 6 CH_tpr_16 7 7 5.08779e-20
Trifolium pratense Tp57577_TGAC_v2_LG3 6 CH_tpr_315 3 3 0.00000312875
Trifolium pratense Tp57577_TGAC_v2_scaf_342 6 CH_tpr_431 3 5 0.0000312656
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_489 2 2 0.0000929238
Vigna mungo CM024069.1 6 CH_vmu_42 5 8 0.000000000000153727
Vitis vinifera chr10 6 CH_vvi_206 4 4 0.00000000314245
Vitis vinifera chr7 6 CH_vvi_32 10 15 3.52752e-26

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001