Functional clusters
Information
- Type InterPro
- Description CTD phosphatase Fcp1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_362 | 5 | CH_aag_307 | 3 | 17 | 0.000366953 |
| Acer truncatum | chr9 | 5 | CH_acertr_677 | 3 | 6 | 0.000121508 |
| Actinidia chinensis | Lachesis_group0 | 5 | CH_ach_125 | 3 | 3 | 0.000000247874 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_11 | 5 | CH_amhyb_144 | 3 | 3 | 0.00000175372 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 5 | CH_amhyb_145 | 3 | 3 | 0.00000175372 |
| Brassica carinata | ChrB04 | 5 | CH_bca_1414 | 3 | 8 | 0.000125614 |
| Brassica napus | C09 | 5 | CH_bna_243 | 4 | 4 | 0.000000000455686 |
| Capsicum annuum | PGAv.1.6.scaffold4 | 5 | CH_can_793 | 2 | 2 | 0.000495663 |
| Corylus avellana | 10 | 5 | CH_cav_341 | 3 | 6 | 0.00000352574 |
| Carica papaya | supercontig_163 | 5 | CH_cpa_165 | 3 | 3 | 0.00000027114 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 5 | CH_cqu_619 | 3 | 4 | 0.0000350087 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_884 | 2 | 2 | 0.000942317 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 5 | CH_eca_885 | 2 | 2 | 0.000942317 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_779 | 3 | 3 | 0.000000431621 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_973 | 3 | 7 | 0.000015097 |
| Lonicera japonica | GWHAAZE00000008 | 5 | CH_lonja_1100 | 3 | 21 | 0.000399671 |
| Magnolia biondii | Chr14 | 5 | CH_mbi_1273 | 2 | 3 | 0.00087414 |
| Medicago truncatula | chr2 | 5 | CH_mtr_349 | 5 | 19 | 0.000000000319176 |
| Quercus lobata | 10 | 5 | CH_qlo_152 | 7 | 7 | 9.60117e-21 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_1062 | 4 | 18 | 0.0000858472 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_116 | 10 | 35 | 1.03918e-18 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_1483 | 4 | 31 | 0.00087504 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_497 | 4 | 4 | 0.0000000283206 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_2592 | 2 | 2 | 0.000730727 |
| Sapria himalayana | scaffold11_13529635 | 5 | CH_shi_151 | 3 | 3 | 0.0000000980909 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_862 | 2 | 2 | 0.000667186 |
| Trochodendron aralioides | group3 | 5 | CH_tar_323 | 3 | 3 | 0.000000648811 |
| Utricularia gibba | unitig_21 | 5 | CH_ugi_390 | 2 | 2 | 0.000820479 |
| Vanilla planifolia | CM028152.1 | 5 | CH_vpl_107 | 4 | 12 | 0.0000000209473 |
| Anthoceros agrestis | Sc2ySwM_362 | 6 | CH_aag_307 | 3 | 17 | 0.000366953 |
| Acer truncatum | chr9 | 6 | CH_acertr_677 | 3 | 6 | 0.000121508 |
| Actinidia chinensis | Lachesis_group0 | 6 | CH_ach_125 | 3 | 3 | 0.000000247874 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_11 | 6 | CH_amhyb_144 | 3 | 3 | 0.00000175372 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 6 | CH_amhyb_145 | 3 | 3 | 0.00000175372 |
| Brassica carinata | ChrB04 | 6 | CH_bca_1414 | 3 | 8 | 0.000125614 |
| Brassica napus | C09 | 6 | CH_bna_243 | 4 | 4 | 0.000000000455686 |
| Capsicum annuum | PGAv.1.6.scaffold4 | 6 | CH_can_793 | 2 | 2 | 0.000495663 |
| Corylus avellana | 10 | 6 | CH_cav_341 | 3 | 6 | 0.00000352574 |
| Carica papaya | supercontig_163 | 6 | CH_cpa_165 | 3 | 3 | 0.00000027114 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3514 | 6 | CH_cqu_619 | 3 | 4 | 0.0000350087 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_884 | 2 | 2 | 0.000942317 |
| Erigeron canadensis | Conyza_canadensis_scaffold:7 | 6 | CH_eca_885 | 2 | 2 | 0.000942317 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_779 | 3 | 3 | 0.000000431621 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_973 | 3 | 7 | 0.000015097 |
| Lonicera japonica | GWHAAZE00000008 | 6 | CH_lonja_1100 | 3 | 21 | 0.000399671 |
| Magnolia biondii | Chr14 | 6 | CH_mbi_1273 | 2 | 3 | 0.00087414 |
| Medicago truncatula | chr2 | 6 | CH_mtr_349 | 5 | 19 | 0.000000000319176 |
| Quercus lobata | 10 | 6 | CH_qlo_152 | 7 | 7 | 9.60117e-21 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_1062 | 4 | 18 | 0.0000858472 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_116 | 10 | 35 | 1.03918e-18 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_1483 | 4 | 31 | 0.00087504 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_497 | 4 | 4 | 0.0000000283206 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_2592 | 2 | 2 | 0.000730727 |
| Sapria himalayana | scaffold11_13529635 | 6 | CH_shi_151 | 3 | 3 | 0.0000000980909 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_862 | 2 | 2 | 0.000667186 |
| Trochodendron aralioides | group3 | 6 | CH_tar_323 | 3 | 3 | 0.000000648811 |
| Utricularia gibba | unitig_21 | 6 | CH_ugi_390 | 2 | 2 | 0.000820479 |
| Vanilla planifolia | CM028152.1 | 6 | CH_vpl_107 | 4 | 12 | 0.0000000209473 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |