Functional clusters

Information

  • Type InterPro
  • Description E3 ubiquitin-protein ligase UBR1-like

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 5 CH_acertr_194 3 3 0.000000007455
Ceratophyllum demersum 2 5 CH_cde_243 2 2 0.0000789796
Carica papaya supercontig_228 5 CH_cpa_384 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_1846 5 CH_cqu_393 3 6 0.000000673416
Olea europaea scaffold309 5 CH_oeu_557 2 2 0.000320273
Olea europaea chr9 5 CH_oeu_558 2 2 0.000320273
Oryza sativa ssp. japonica chr01 5 CH_osa_499 2 2 0.0000528123
Petunia axillaris Peaxi162Scf00094 5 CH_pax_562 2 2 0.000211067
Simmondsia chinensis GWHAASQ00000020 5 CH_sci_139 3 6 0.000000217459
Sapria himalayana scaffold11_13529635 5 CH_shi_332 2 2 0.0000571804
Utricularia gibba unitig_0 5 CH_ugi_194 2 2 0.0000820479
Vitis vinifera chr8 5 CH_vvi_623 2 2 0.000228189
Acer truncatum chr8 6 CH_acertr_194 3 3 0.000000007455
Ceratophyllum demersum 2 6 CH_cde_243 2 2 0.0000789796
Carica papaya supercontig_228 6 CH_cpa_384 2 2 0.0000950661
Chenopodium quinoa C_Quinoa_Scaffold_1846 6 CH_cqu_393 3 6 0.000000673416
Olea europaea scaffold309 6 CH_oeu_557 2 2 0.000320273
Olea europaea chr9 6 CH_oeu_558 2 2 0.000320273
Oryza sativa ssp. japonica chr01 6 CH_osa_499 2 2 0.0000528123
Petunia axillaris Peaxi162Scf00094 6 CH_pax_562 2 2 0.000211067
Simmondsia chinensis GWHAASQ00000020 6 CH_sci_139 3 6 0.000000217459
Sapria himalayana scaffold11_13529635 6 CH_shi_332 2 2 0.0000571804
Utricularia gibba unitig_0 6 CH_ugi_194 2 2 0.0000820479
Vitis vinifera chr8 6 CH_vvi_623 2 2 0.000228189

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001