Functional clusters
Information
- Type InterPro
- Description Protein phosphatase 2C
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_228 | 5 | CH_aag_336 | 2 | 2 | 0.000481541 |
| Acer truncatum | chr4 | 5 | CH_acertr_21 | 9 | 20 | 7.04376e-21 |
| Cannabis sativa | NC_044378.1 | 5 | CH_cansat_308 | 3 | 4 | 0.0000073972 |
| Capsicum annuum | PGAv.1.6.scaffold700 | 5 | CH_can_180 | 5 | 9 | 0.000000000376453 |
| Capsicum annuum | PGAv.1.6.scaffold243 | 5 | CH_can_308 | 4 | 7 | 0.000000180889 |
| Corylus avellana | 4 | 5 | CH_cav_371 | 4 | 26 | 0.000006634 |
| Cardamine hirsuta | Chr7 | 5 | CH_chi_725 | 2 | 2 | 0.000414723 |
| Citrullus lanatus | CG_Chr11 | 5 | CH_cla_189 | 3 | 12 | 0.0000518751 |
| Cucumis sativus L. | chr4 | 5 | CH_csa_352 | 3 | 15 | 0.0000949656 |
| Erythranthe guttata | scaffold_10 | 5 | CH_egut_174 | 4 | 4 | 0.000000000382242 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_537 | 4 | 23 | 0.00000119438 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_758 | 2 | 2 | 0.000792184 |
| Prunus persica | Pp04 | 5 | CH_ppe_244 | 4 | 5 | 0.00000000130742 |
| Quercus lobata | 5 | 5 | CH_qlo_1036 | 3 | 6 | 0.00000447658 |
| Rhododendron simsii | chr10 | 5 | CH_rsi_327 | 4 | 6 | 0.00000000864231 |
| Rhododendron simsii | chr03 | 5 | CH_rsi_494 | 3 | 3 | 0.0000017865 |
| Salvia bowleyana | GWHASIU00000006 | 5 | CH_sbo_744 | 2 | 2 | 0.00068247 |
| Sechium edule | LG04 | 5 | CH_sed_424 | 3 | 14 | 0.00033267 |
| Solanum tuberosum | ST4.03ch07 | 5 | CH_stu_942 | 3 | 15 | 0.000813012 |
| Trochodendron aralioides | group11 | 5 | CH_tar_214 | 4 | 13 | 0.0000000324579 |
| Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_293 | 3 | 3 | 0.00000213722 |
| Zea mays | 4 | 5 | CH_zma_226 | 3 | 4 | 0.00000188212 |
| Anthoceros agrestis | Sc2ySwM_228 | 6 | CH_aag_336 | 2 | 2 | 0.000481541 |
| Acer truncatum | chr4 | 6 | CH_acertr_21 | 9 | 20 | 7.04376e-21 |
| Cannabis sativa | NC_044378.1 | 6 | CH_cansat_308 | 3 | 4 | 0.0000073972 |
| Capsicum annuum | PGAv.1.6.scaffold700 | 6 | CH_can_180 | 5 | 9 | 0.000000000376453 |
| Capsicum annuum | PGAv.1.6.scaffold243 | 6 | CH_can_308 | 4 | 7 | 0.000000180889 |
| Corylus avellana | 4 | 6 | CH_cav_371 | 4 | 26 | 0.000006634 |
| Cardamine hirsuta | Chr7 | 6 | CH_chi_725 | 2 | 2 | 0.000414723 |
| Citrullus lanatus | CG_Chr11 | 6 | CH_cla_189 | 3 | 12 | 0.0000518751 |
| Cucumis sativus L. | chr4 | 6 | CH_csa_352 | 3 | 15 | 0.0000949656 |
| Erythranthe guttata | scaffold_10 | 6 | CH_egut_174 | 4 | 4 | 0.000000000382242 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_537 | 4 | 23 | 0.00000119438 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_758 | 2 | 2 | 0.000792184 |
| Prunus persica | Pp04 | 6 | CH_ppe_244 | 4 | 5 | 0.00000000130742 |
| Quercus lobata | 5 | 6 | CH_qlo_1036 | 3 | 6 | 0.00000447658 |
| Rhododendron simsii | chr10 | 6 | CH_rsi_327 | 4 | 6 | 0.00000000864231 |
| Rhododendron simsii | chr03 | 6 | CH_rsi_494 | 3 | 3 | 0.0000017865 |
| Salvia bowleyana | GWHASIU00000006 | 6 | CH_sbo_744 | 2 | 2 | 0.00068247 |
| Sechium edule | LG04 | 6 | CH_sed_424 | 3 | 14 | 0.00033267 |
| Solanum tuberosum | ST4.03ch07 | 6 | CH_stu_942 | 3 | 15 | 0.000813012 |
| Trochodendron aralioides | group11 | 6 | CH_tar_214 | 4 | 13 | 0.0000000324579 |
| Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_293 | 3 | 3 | 0.00000213722 |
| Zea mays | 4 | 6 | CH_zma_226 | 3 | 4 | 0.00000188212 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |