Functional clusters
Information
- Type InterPro
- Description Ovate protein family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis lyrata | scaffold_5 | 5 | CH_aly_627 | 3 | 8 | 0.000416254 |
| Arabidopsis thaliana | Chr3 | 5 | CH_ath_530 | 3 | 13 | 0.000340567 |
| Cardamine hirsuta | Chr5 | 5 | CH_chi_457 | 3 | 5 | 0.0000584308 |
| Capsella rubella | scaffold_5 | 5 | CH_cru_474 | 3 | 5 | 0.0000776312 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_1282 | 3 | 13 | 0.000977432 |
| Olea europaea | chr17 | 5 | CH_oeu_243 | 3 | 3 | 0.00000865072 |
| Arabidopsis lyrata | scaffold_5 | 6 | CH_aly_627 | 3 | 8 | 0.000416254 |
| Arabidopsis thaliana | Chr3 | 6 | CH_ath_530 | 3 | 13 | 0.000340567 |
| Cardamine hirsuta | Chr5 | 6 | CH_chi_457 | 3 | 5 | 0.0000584308 |
| Capsella rubella | scaffold_5 | 6 | CH_cru_474 | 3 | 5 | 0.0000776312 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_1282 | 3 | 13 | 0.000977432 |
| Olea europaea | chr17 | 6 | CH_oeu_243 | 3 | 3 | 0.00000865072 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |