Functional clusters

Information

  • Type InterPro
  • Description Protein effector of transcription

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr7 5 CH_acertr_297 3 6 0.000000149084
Arabidopsis lyrata scaffold_8 5 CH_aly_544 2 2 0.000198013
Arabidopsis thaliana Chr5 5 CH_ath_430 2 2 0.0000859476
Brassica rapa A05 5 CH_bra_590 2 3 0.000772726
Citrus clementina scaffold_1 5 CH_ccl_555 2 2 0.0000820311
Cardamine hirsuta Chr8 5 CH_chi_636 2 2 0.000207361
Carica papaya supercontig_7 5 CH_cpa_382 2 2 0.0000950661
Capsella rubella scaffold_8 5 CH_cru_543 2 2 0.000219346
Fragaria vesca Fvb1 5 CH_fve_416 3 14 0.00000189428
Gossypium hirsutum D08 5 CH_ghi_224 4 4 0.00000000000199902
Gossypium hirsutum A08 5 CH_ghi_429 3 3 0.0000000374316
Malus domestica Chr02 5 CH_mdo_1291 2 6 0.000568774
Medicago truncatula chr6 5 CH_mtr_457 3 3 0.0000000101287
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_992 2 2 0.0000398653
Acer truncatum chr7 6 CH_acertr_297 3 6 0.000000149084
Arabidopsis lyrata scaffold_8 6 CH_aly_544 2 2 0.000198013
Arabidopsis thaliana Chr5 6 CH_ath_430 2 2 0.0000859476
Brassica rapa A05 6 CH_bra_590 2 3 0.000772726
Citrus clementina scaffold_1 6 CH_ccl_555 2 2 0.0000820311
Cardamine hirsuta Chr8 6 CH_chi_636 2 2 0.000207361
Carica papaya supercontig_7 6 CH_cpa_382 2 2 0.0000950661
Capsella rubella scaffold_8 6 CH_cru_543 2 2 0.000219346
Fragaria vesca Fvb1 6 CH_fve_416 3 14 0.00000189428
Gossypium hirsutum D08 6 CH_ghi_224 4 4 0.00000000000199902
Gossypium hirsutum A08 6 CH_ghi_429 3 3 0.0000000374316
Malus domestica Chr02 6 CH_mdo_1291 2 6 0.000568774
Medicago truncatula chr6 6 CH_mtr_457 3 3 0.0000000101287
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_992 2 2 0.0000398653

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001