Functional clusters

Information

  • Type InterPro
  • Description TATA box-binding protein-associated factor RNA polymerase I subunit C

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00001 5 CH_atr_592 2 2 0.000476644
Brassica carinata ChrB06 5 CH_bca_1451 2 2 0.000128259
Brassica napus C05 5 CH_bna_549 3 13 0.000000591132
Carya illinoinensis Chr12 5 CH_cil_759 2 2 0.000371897
Magnolia biondii Chr07 5 CH_mbi_403 3 7 0.000000123821
Quercus lobata 7 5 CH_qlo_1813 3 51 0.000830093
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_1143 2 2 0.000119596
Sequoiadendron giganteum chr6 5 CH_sgi_1829 2 2 0.0000487151
Amborella trichopoda AmTr_v1.0_scaffold00001 6 CH_atr_592 2 2 0.000476644
Brassica carinata ChrB06 6 CH_bca_1451 2 2 0.000128259
Brassica napus C05 6 CH_bna_549 3 13 0.000000591132
Carya illinoinensis Chr12 6 CH_cil_759 2 2 0.000371897
Magnolia biondii Chr07 6 CH_mbi_403 3 7 0.000000123821
Quercus lobata 7 6 CH_qlo_1813 3 51 0.000830093
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_1143 2 2 0.000119596
Sequoiadendron giganteum chr6 6 CH_sgi_1829 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001