Functional clusters

Information

  • Type InterPro
  • Description Gnk2-homologous domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 5 CH_aly_6 15 18 2.81423e-33
Brassica carinata ChrC04 5 CH_bca_1226 5 16 0.0000434291
Brassica napus C01 5 CH_bna_7 20 62 1.38266e-33
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_3 21 48 8.05208e-40
Camellia sinensis var. sinensis Chr8 5 CH_camsi_4 29 80 1.20314e-60
Corylus avellana 2 5 CH_cav_2 26 32 3.29826e-58
Cardamine hirsuta Chr7 5 CH_chi_1 30 43 4.64583e-61
Cardamine hirsuta Chr8 5 CH_chi_32 13 22 1.07369e-22
Capsella rubella scaffold_6 5 CH_cru_52 10 14 2.59759e-17
Davidia involucrata GWHABJS00000020 5 CH_din_1 23 36 1.18059e-52
Durio zibethinus NW_019168037.1 5 CH_dzi_52 9 24 4.88424e-16
Erythranthe guttata scaffold_13 5 CH_egut_33 11 11 6.11067e-27
Lupinus albus Lalb_Chr06 5 CH_lal_213 4 5 0.000000242524
Medicago truncatula chr1 5 CH_mtr_8 23 37 7.57153e-51
Quercus lobata 6 5 CH_qlo_1531 4 6 0.000248604
Quercus lobata 10 5 CH_qlo_77 19 49 9.22213e-28
Quercus lobata 11 5 CH_qlo_99 13 15 1.05039e-24
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_309 7 19 0.0000000000231469
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_38 14 24 3.96822e-30
Salix brachista GWHAAZH00000011 5 CH_sbr_8 21 69 1.29459e-35
Simmondsia chinensis GWHAASQ00000017 5 CH_sci_31 8 10 4.77109e-16
Sequoiadendron giganteum chr6 5 CH_sgi_78 17 35 5.25646e-30
Solanum lycopersicum SL4.0ch03 5 CH_sly_548 3 3 0.0000401526
Selenicereus undatus Scaffold_33680 5 CH_sun_5 12 31 2.6447e-26
Vitis vinifera chrUn 5 CH_vvi_110 7 10 0.000000000000058788
Arabidopsis lyrata scaffold_7 6 CH_aly_6 15 18 2.81423e-33
Brassica carinata ChrC04 6 CH_bca_1226 5 16 0.0000434291
Brassica napus C01 6 CH_bna_7 20 62 1.38266e-33
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_3 21 48 8.05208e-40
Camellia sinensis var. sinensis Chr8 6 CH_camsi_4 29 80 1.20314e-60
Corylus avellana 2 6 CH_cav_2 26 32 3.29826e-58
Cardamine hirsuta Chr7 6 CH_chi_1 30 43 4.64583e-61
Cardamine hirsuta Chr8 6 CH_chi_32 13 22 1.07369e-22
Capsella rubella scaffold_6 6 CH_cru_52 10 14 2.59759e-17
Davidia involucrata GWHABJS00000020 6 CH_din_1 23 36 1.18059e-52
Durio zibethinus NW_019168037.1 6 CH_dzi_52 9 24 4.88424e-16
Erythranthe guttata scaffold_13 6 CH_egut_33 11 11 6.11067e-27
Fragaria x ananassa Fvb3-1 6 CH_fan_60 8 17 6.04833e-16
Lupinus albus Lalb_Chr06 6 CH_lal_213 4 5 0.000000242524
Medicago truncatula chr1 6 CH_mtr_8 23 37 7.57153e-51
Quercus lobata 6 6 CH_qlo_1531 4 6 0.000248604
Quercus lobata 10 6 CH_qlo_77 19 49 9.22213e-28
Quercus lobata 11 6 CH_qlo_99 13 15 1.05039e-24
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_309 7 19 0.0000000000231469
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_38 14 24 3.96822e-30
Salix brachista GWHAAZH00000011 6 CH_sbr_8 21 69 1.29459e-35
Simmondsia chinensis GWHAASQ00000017 6 CH_sci_31 8 10 4.77109e-16
Sequoiadendron giganteum chr6 6 CH_sgi_78 17 35 5.25646e-30
Solanum lycopersicum SL4.0ch03 6 CH_sly_548 3 3 0.0000401526
Selenicereus undatus Scaffold_33680 6 CH_sun_5 12 31 2.6447e-26
Vitis vinifera chrUn 6 CH_vvi_110 7 10 0.000000000000058788

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001