Functional clusters

Information

  • Type InterPro
  • Description Dicer dimerisation domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-5 5 CH_aar_216 3 8 0.00000698797
Brassica carinata ChrB03 5 CH_bca_1596 2 2 0.000213764
Brassica oleracea C5 5 CH_bol_822 2 4 0.000588328
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_210 3 4 0.000000411243
Capsicum annuum PGAv.1.6.scaffold321 5 CH_can_713 2 2 0.000247831
Citrus clementina scaffold_6 5 CH_ccl_781 2 2 0.000820311
Glycine max Gm09 5 CH_gma_956 2 2 0.00079707
Hydrangea macrophylla Hma1.2p1_0182F.1 5 CH_hma_451 2 2 0.000111086
Physcomitrium patens Chr01 5 CH_ppa_384 2 2 0.000612726
Salvia bowleyana GWHASIU00000002 5 CH_sbo_743 2 2 0.00068247
Sequoiadendron giganteum chr4 5 CH_sgi_2588 2 2 0.000730727
Solanum lycopersicum SL4.0ch11 5 CH_sly_320 3 3 0.000000180867
Solanum pennellii Spenn-ch11 5 CH_spe_281 3 3 0.000000103868
Vigna mungo CM024075.1 5 CH_vmu_648 2 2 0.000969211
Aethionema arabicum LG-5 6 CH_aar_216 3 8 0.00000698797
Brassica carinata ChrB03 6 CH_bca_1596 2 2 0.000213764
Brassica oleracea C5 6 CH_bol_822 2 4 0.000588328
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_210 3 4 0.000000411243
Capsicum annuum PGAv.1.6.scaffold321 6 CH_can_713 2 2 0.000247831
Citrus clementina scaffold_6 6 CH_ccl_781 2 2 0.000820311
Glycine max Gm09 6 CH_gma_956 2 2 0.00079707
Hydrangea macrophylla Hma1.2p1_0182F.1 6 CH_hma_451 2 2 0.000111086
Physcomitrium patens Chr01 6 CH_ppa_384 2 2 0.000612726
Salvia bowleyana GWHASIU00000002 6 CH_sbo_743 2 2 0.00068247
Sequoiadendron giganteum chr4 6 CH_sgi_2588 2 2 0.000730727
Solanum lycopersicum SL4.0ch11 6 CH_sly_320 3 3 0.000000180867
Solanum pennellii Spenn-ch11 6 CH_spe_281 3 3 0.000000103868
Vigna mungo CM024075.1 6 CH_vmu_648 2 2 0.000969211

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001