Functional clusters

Information

  • Type InterPro
  • Description Methyl-CpG-binding domain-containing protein 8

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group12 5 CH_ach_620 2 2 0.000814819
Actinidia chinensis Lachesis_group27 5 CH_ach_621 2 2 0.000814819
Amborella trichopoda AmTr_v1.0_scaffold00038 5 CH_atr_406 2 2 0.0000794407
Camellia sinensis var. sinensis Chr3 5 CH_camsi_438 3 5 0.0000000315391
Carica papaya supercontig_42 5 CH_cpa_629 2 3 0.000855527
Durio zibethinus NW_019167826.1 5 CH_dzi_493 2 2 0.000278093
Oryza sativa ssp. japonica chr08 5 CH_osa_653 2 2 0.000316874
Oryza sativa ssp. japonica chr09 5 CH_osa_654 2 2 0.000316874
Papaver somniferum NC_039359.1 5 CH_pso_982 2 2 0.000135176
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1474 2 2 0.00083717
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_483 4 18 0.000000020338
Striga asiatica scaffold74 5 CH_sas_202 2 2 0.000375223
Solanum lycopersicum SL4.0ch04 5 CH_sly_735 2 2 0.000176082
Solanum pennellii Spenn-ch02 5 CH_spe_481 3 16 0.0000166068
Solanum tuberosum ST4.03ch04 5 CH_stu_723 2 2 0.000153736
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_626 2 2 0.000278772
Actinidia chinensis Lachesis_group12 6 CH_ach_620 2 2 0.000814819
Actinidia chinensis Lachesis_group27 6 CH_ach_621 2 2 0.000814819
Amborella trichopoda AmTr_v1.0_scaffold00038 6 CH_atr_406 2 2 0.0000794407
Camellia sinensis var. sinensis Chr3 6 CH_camsi_438 3 5 0.0000000315391
Carica papaya supercontig_42 6 CH_cpa_629 2 3 0.000855527
Durio zibethinus NW_019167826.1 6 CH_dzi_493 2 2 0.000278093
Oryza sativa ssp. japonica chr08 6 CH_osa_653 2 2 0.000316874
Oryza sativa ssp. japonica chr09 6 CH_osa_654 2 2 0.000316874
Papaver somniferum NC_039359.1 6 CH_pso_982 2 2 0.000135176
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1474 2 2 0.00083717
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_483 4 18 0.000000020338
Striga asiatica scaffold74 6 CH_sas_202 2 2 0.000375223
Solanum lycopersicum SL4.0ch04 6 CH_sly_735 2 2 0.000176082
Solanum pennellii Spenn-ch02 6 CH_spe_481 3 16 0.0000166068
Solanum tuberosum ST4.03ch04 6 CH_stu_723 2 2 0.000153736
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_626 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001