Functional clusters

Information

  • Type InterPro
  • Description 1,4-alpha-glucan-branching enzyme

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Corchorus olitorius AWUE01014262.1 5 CH_col_169 2 2 0.000292099
Carica papaya supercontig_12 5 CH_cpa_512 2 2 0.000285198
Helianthus annuus HanXRQChr13 5 CH_han_1003 2 2 0.000231857
Hydrangea macrophylla Hma1.2p1_0956F.1 5 CH_hma_658 2 2 0.000666519
Magnolia biondii Chr10 5 CH_mbi_509 3 8 0.000000792362
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1337 2 2 0.000398653
Rhododendron simsii chr04 5 CH_rsi_896 2 2 0.000387184
Sequoiadendron giganteum chr10 5 CH_sgi_1290 3 4 0.00000119594
Sequoiadendron giganteum chr4 5 CH_sgi_672 4 5 0.00000000021849
Selenicereus undatus Scaffold_33673 5 CH_sun_340 2 2 0.000435983
Utricularia gibba unitig_32 5 CH_ugi_388 2 2 0.000820479
Corchorus olitorius AWUE01014262.1 6 CH_col_169 2 2 0.000292099
Carica papaya supercontig_12 6 CH_cpa_512 2 2 0.000285198
Helianthus annuus HanXRQChr13 6 CH_han_1003 2 2 0.000231857
Hydrangea macrophylla Hma1.2p1_0956F.1 6 CH_hma_658 2 2 0.000666519
Magnolia biondii Chr10 6 CH_mbi_509 3 8 0.000000792362
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1337 2 2 0.000398653
Rhododendron simsii chr04 6 CH_rsi_896 2 2 0.000387184
Sequoiadendron giganteum chr10 6 CH_sgi_1290 3 4 0.00000119594
Sequoiadendron giganteum chr4 6 CH_sgi_672 4 5 0.00000000021849
Selenicereus undatus Scaffold_33673 6 CH_sun_340 2 2 0.000435983
Utricularia gibba unitig_32 6 CH_ugi_388 2 2 0.000820479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001