Functional clusters
Information
- Type InterPro
- Description Protein transport protein Sec23
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cicer arietinum L. | Ca_LG5_v3 | 5 | CH_car_416 | 3 | 41 | 0.000965059 |
| Hydrangea macrophylla | Hma1.2p1_0944F.1 | 5 | CH_hma_11 | 7 | 9 | 4.26462e-20 |
| Medicago truncatula | chr6 | 5 | CH_mtr_569 | 3 | 3 | 0.000000141802 |
| Salix brachista | GWHAAZH00000014 | 5 | CH_sbr_113 | 6 | 22 | 0.00000000000499059 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_1085 | 3 | 3 | 0.000000124594 |
| Trochodendron aralioides | group1 | 5 | CH_tar_725 | 3 | 12 | 0.000195894 |
| Cicer arietinum L. | Ca_LG5_v3 | 6 | CH_car_416 | 3 | 41 | 0.000965059 |
| Hydrangea macrophylla | Hma1.2p1_0944F.1 | 6 | CH_hma_11 | 7 | 9 | 4.26462e-20 |
| Medicago truncatula | chr6 | 6 | CH_mtr_569 | 3 | 3 | 0.000000141802 |
| Salix brachista | GWHAAZH00000014 | 6 | CH_sbr_113 | 6 | 22 | 0.00000000000499059 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_1085 | 3 | 3 | 0.000000124594 |
| Trochodendron aralioides | group1 | 6 | CH_tar_725 | 3 | 12 | 0.000195894 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |