Functional clusters
Information
- Type InterPro
- Description Galactose oxidase, central domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr7 | 5 | CH_acertr_57 | 6 | 9 | 0.0000000000000164616 |
| Chlamydomonas reinhardtii | chromosome_3 | 5 | CH_cre_79 | 3 | 3 | 0.0000188025 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_197 | 5 | 5 | 0.000000000000289759 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_194 | 6 | 10 | 0.0000000000000184245 |
| Vanilla planifolia | CM028153.1 | 5 | CH_vpl_232 | 4 | 27 | 0.00000266497 |
| Acer truncatum | chr7 | 6 | CH_acertr_57 | 6 | 9 | 0.0000000000000164616 |
| Chlamydomonas reinhardtii | chromosome_3 | 6 | CH_cre_79 | 3 | 3 | 0.0000188025 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_197 | 5 | 5 | 0.000000000000289759 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_194 | 6 | 10 | 0.0000000000000184245 |
| Vanilla planifolia | CM028153.1 | 6 | CH_vpl_232 | 4 | 27 | 0.00000266497 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |