Functional clusters

Information

  • Type InterPro
  • Description VPS9 domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00099 5 CH_atr_590 2 2 0.000476644
Populus trichocarpa Chr13 5 CH_ptr_696 2 2 0.000346801
Sequoiadendron giganteum chr2 5 CH_sgi_818 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch01 5 CH_sly_683 2 3 0.000176077
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_625 2 2 0.000278772
Amborella trichopoda AmTr_v1.0_scaffold00099 6 CH_atr_590 2 2 0.000476644
Populus trichocarpa Chr13 6 CH_ptr_696 2 2 0.000346801
Sequoiadendron giganteum chr2 6 CH_sgi_818 3 3 0.00000000355983
Solanum lycopersicum SL4.0ch01 6 CH_sly_683 2 3 0.000176077
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_625 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001