Functional clusters

Information

  • Type InterPro
  • Description RNA polymerase Rpb7-like, N-terminal domain superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 5 CH_acertr_537 3 11 0.000068792
Eucalyptus grandis Chr08 5 CH_egr_1361 2 2 0.000585274
Fragaria vesca Fvb4 5 CH_fve_479 3 8 0.0000101973
Gossypium hirsutum A07 5 CH_ghi_1228 3 22 0.000598099
Lonicera japonica GWHAAZE00000006 5 CH_lonja_1172 2 2 0.000598874
Petunia axillaris Peaxi162Scf00065 5 CH_pax_649 2 2 0.000422134
Physcomitrium patens Chr19 5 CH_ppa_383 2 2 0.000612726
Prunus persica Pp01 5 CH_ppe_402 3 4 0.00000116844
Quercus lobata 9 5 CH_qlo_1792 2 2 0.000774433
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_536 5 78 0.0000000500763
Salix brachista GWHAAZH00000010 5 CH_sbr_671 2 2 0.00063014
Theobroma cacao Chromosome_10 5 CH_tca_441 3 7 0.00000985074
Acer truncatum chr4 6 CH_acertr_537 3 11 0.000068792
Eucalyptus grandis Chr08 6 CH_egr_1361 2 2 0.000585274
Fragaria x ananassa Fvb4-3 6 CH_fan_804 3 9 0.0000763344
Fragaria vesca Fvb4 6 CH_fve_479 3 8 0.0000101973
Gossypium hirsutum A07 6 CH_ghi_1228 3 22 0.000598099
Lonicera japonica GWHAAZE00000006 6 CH_lonja_1172 2 2 0.000598874
Petunia axillaris Peaxi162Scf00065 6 CH_pax_649 2 2 0.000422134
Physcomitrium patens Chr19 6 CH_ppa_383 2 2 0.000612726
Prunus persica Pp01 6 CH_ppe_402 3 4 0.00000116844
Quercus lobata 9 6 CH_qlo_1792 2 2 0.000774433
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_536 5 78 0.0000000500763
Salix brachista GWHAAZH00000010 6 CH_sbr_671 2 2 0.00063014
Theobroma cacao Chromosome_10 6 CH_tca_441 3 7 0.00000985074

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001