Functional clusters

Information

  • Type InterPro
  • Description Transcription factor, MADS-box superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsella rubella scaffold_6 5 CH_cru_141 6 6 0.000000000231637
Capsella rubella scaffold_1 5 CH_cru_177 7 15 0.00000000634185
Malus domestica Chr04 5 CH_mdo_1333 3 3 0.000575755
Malus domestica Chr06 5 CH_mdo_767 4 6 0.0000187661
Medicago truncatula chr3 5 CH_mtr_582 5 7 0.000000193135
Olea europaea chr15 5 CH_oeu_138 6 21 0.000000143411
Prunus persica Pp06 5 CH_ppe_656 6 48 0.000201395
Pisum sativum chr6LG2 5 CH_psa_57 12 66 0.00000000000000255032
Solanum tuberosum ST4.03ch04 5 CH_stu_215 10 50 0.000000000271287
Capsella rubella scaffold_6 6 CH_cru_141 6 6 0.000000000231637
Capsella rubella scaffold_1 6 CH_cru_177 7 15 0.00000000634185
Malus domestica Chr04 6 CH_mdo_1333 3 3 0.000575755
Malus domestica Chr06 6 CH_mdo_767 4 6 0.0000187661
Medicago truncatula chr3 6 CH_mtr_582 5 7 0.000000193135
Olea europaea chr15 6 CH_oeu_138 6 21 0.000000143411
Prunus persica Pp06 6 CH_ppe_656 6 48 0.000201395
Pisum sativum chr6LG2 6 CH_psa_57 12 66 0.00000000000000255032
Solanum tuberosum ST4.03ch04 6 CH_stu_215 10 50 0.000000000271287

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001