Functional clusters

Information

  • Type InterPro
  • Description Zinc finger, CCHC-type superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica oleracea C1 5 CH_bol_747 4 12 0.00036696
Erigeron canadensis Conyza_canadensis_scaffold:6 5 CH_eca_475 23 67 0.0000190246
Erigeron canadensis Conyza_canadensis_scaffold:1 5 CH_eca_482 25 79 0.0000242406
Erigeron canadensis Conyza_canadensis_scaffold:4 5 CH_eca_604 12 20 0.000132744
Erigeron canadensis Conyza_canadensis_scaffold:7 5 CH_eca_665 22 69 0.000221345
Hydrangea macrophylla Hma1.2p1_0450F.1 5 CH_hma_243 4 6 0.0000342367
Malus domestica Chr01 5 CH_mdo_1452 6 79 0.000927358
Solanum pennellii Spenn-ch04 5 CH_spe_223 25 77 0.0000000133378
Solanum pennellii Spenn-ch04 5 CH_spe_596 21 80 0.0000856923
Solanum pennellii Spenn-ch01 5 CH_spe_689 16 49 0.000225048
Brassica oleracea C1 6 CH_bol_747 4 12 0.00036696
Erigeron canadensis Conyza_canadensis_scaffold:6 6 CH_eca_475 23 67 0.0000190246
Erigeron canadensis Conyza_canadensis_scaffold:1 6 CH_eca_482 25 79 0.0000242406
Erigeron canadensis Conyza_canadensis_scaffold:4 6 CH_eca_604 12 20 0.000132744
Erigeron canadensis Conyza_canadensis_scaffold:7 6 CH_eca_665 22 69 0.000221345
Hydrangea macrophylla Hma1.2p1_0450F.1 6 CH_hma_243 4 6 0.0000342367
Malus domestica Chr01 6 CH_mdo_1452 6 79 0.000927358
Solanum pennellii Spenn-ch04 6 CH_spe_223 25 77 0.0000000133378
Solanum pennellii Spenn-ch04 6 CH_spe_596 21 80 0.0000856923
Solanum pennellii Spenn-ch01 6 CH_spe_689 16 49 0.000225048

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001