Functional clusters
Information
- Type InterPro
- Description Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_165 | 3 | 3 | 0.0000282617 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_282 | 3 | 3 | 0.0000221908 |
| Citrus clementina | scaffold_2 | 5 | CH_ccl_595 | 3 | 5 | 0.000204023 |
| Marchantia polymorpha | scaffold_115 | 5 | CH_mpo_171 | 3 | 4 | 0.000213853 |
| Medicago truncatula | chr3 | 5 | CH_mtr_827 | 3 | 3 | 0.0000102807 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_529 | 3 | 9 | 0.000344505 |
| Olea europaea | chr11 | 5 | CH_oeu_292 | 3 | 4 | 0.0000393031 |
| Olea europaea | chr7 | 5 | CH_oeu_293 | 3 | 4 | 0.0000393031 |
| Oryza sativa ssp. japonica | chr03 | 5 | CH_osa_535 | 3 | 5 | 0.0000961387 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_378 | 4 | 14 | 0.00000249545 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1558 | 3 | 3 | 0.0000379478 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_977 | 4 | 4 | 0.0000000351258 |
| Sapria himalayana | scaffold5_19632047 | 5 | CH_shi_237 | 3 | 5 | 0.0000474897 |
| Selaginella moellendorffii | scaffold_64 | 5 | CH_smo_18 | 9 | 24 | 0.0000000000000142522 |
| Selaginella moellendorffii | scaffold_70 | 5 | CH_smo_97 | 5 | 11 | 0.000000400029 |
| Selenicereus undatus | Scaffold_33678 | 5 | CH_sun_221 | 3 | 4 | 0.000103714 |
| Vigna mungo | CM024072.1 | 5 | CH_vmu_275 | 3 | 3 | 0.0000183183 |
| Vitis vinifera | chr12 | 5 | CH_vvi_321 | 5 | 23 | 0.000000355016 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_165 | 3 | 3 | 0.0000282617 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_282 | 3 | 3 | 0.0000221908 |
| Citrus clementina | scaffold_2 | 6 | CH_ccl_595 | 3 | 5 | 0.000204023 |
| Marchantia polymorpha | scaffold_115 | 6 | CH_mpo_171 | 3 | 4 | 0.000213853 |
| Medicago truncatula | chr3 | 6 | CH_mtr_827 | 3 | 3 | 0.0000102807 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_529 | 3 | 9 | 0.000344505 |
| Olea europaea | chr11 | 6 | CH_oeu_292 | 3 | 4 | 0.0000393031 |
| Olea europaea | chr7 | 6 | CH_oeu_293 | 3 | 4 | 0.0000393031 |
| Oryza sativa ssp. japonica | chr03 | 6 | CH_osa_535 | 3 | 5 | 0.0000961387 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_378 | 4 | 14 | 0.00000249545 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1558 | 3 | 3 | 0.0000379478 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_977 | 4 | 4 | 0.0000000351258 |
| Sapria himalayana | scaffold5_19632047 | 6 | CH_shi_237 | 3 | 5 | 0.0000474897 |
| Selaginella moellendorffii | scaffold_64 | 6 | CH_smo_18 | 9 | 24 | 0.0000000000000142522 |
| Selaginella moellendorffii | scaffold_70 | 6 | CH_smo_97 | 5 | 11 | 0.000000400029 |
| Selenicereus undatus | Scaffold_33678 | 6 | CH_sun_221 | 3 | 4 | 0.000103714 |
| Vigna mungo | CM024072.1 | 6 | CH_vmu_275 | 3 | 3 | 0.0000183183 |
| Vitis vinifera | chr12 | 6 | CH_vvi_321 | 5 | 23 | 0.000000355016 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |