Functional clusters
Information
- Type InterPro
- Description Peptidase S8/S53 domain superfamily
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr1 | 5 | CH_acertr_509 | 4 | 9 | 0.0000482831 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 5 | CH_amhyb_1 | 20 | 54 | 1.74356e-36 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 5 | CH_amhyb_199 | 5 | 24 | 0.0000489581 |
| Aquilegia oxysepala | CHR06 | 5 | CH_aox_279 | 4 | 7 | 0.0000197937 |
| Amborella trichopoda | AmTr_v1.0_scaffold00122 | 5 | CH_atr_331 | 4 | 5 | 0.0000228686 |
| Amborella trichopoda | AmTr_v1.0_scaffold00017 | 5 | CH_atr_4 | 21 | 29 | 9.82875e-42 |
| Camellia sinensis var. sinensis | Chr8 | 5 | CH_camsi_898 | 4 | 11 | 0.0000374455 |
| Cannabis sativa | NC_044374.1 | 5 | CH_cansat_216 | 4 | 4 | 0.000000195634 |
| Capsicum annuum | PGAv.1.6.scaffold587 | 5 | CH_can_132 | 7 | 7 | 0.000000000000907348 |
| Corylus avellana | 4 | 5 | CH_cav_156 | 6 | 9 | 0.000000000921586 |
| Carpinus fangiana | scaffold12 | 5 | CH_cfa_623 | 3 | 4 | 0.000901528 |
| Cardamine hirsuta | Chr1 | 5 | CH_chi_312 | 4 | 4 | 0.000000590185 |
| Cardamine hirsuta | Chr2 | 5 | CH_chi_669 | 4 | 12 | 0.000288271 |
| Davidia involucrata | GWHABJS00000013 | 5 | CH_din_142 | 6 | 7 | 0.0000000000586395 |
| Davidia involucrata | GWHABJS00000005 | 5 | CH_din_175 | 5 | 5 | 0.00000000353316 |
| Davidia involucrata | GWHABJS00000006 | 5 | CH_din_782 | 3 | 3 | 0.000606693 |
| Glycine max | Gm09 | 5 | CH_gma_851 | 3 | 3 | 0.00053356 |
| Lupinus albus | Lalb_Chr07 | 5 | CH_lal_322 | 4 | 4 | 0.00000556913 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_178 | 7 | 7 | 0.0000000000000271556 |
| Magnolia biondii | Chr18 | 5 | CH_mbi_164 | 6 | 7 | 0.00000000000855833 |
| Olea europaea | chr8 | 5 | CH_oeu_391 | 3 | 3 | 0.000118477 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_181 | 11 | 13 | 2.30396e-21 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_957 | 5 | 5 | 0.0000000210462 |
| Selaginella moellendorffii | scaffold_52 | 5 | CH_smo_167 | 5 | 11 | 0.0000149413 |
| Selaginella moellendorffii | scaffold_77 | 5 | CH_smo_168 | 5 | 11 | 0.0000149413 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_885 | 3 | 4 | 0.000599139 |
| Trochodendron aralioides | group11 | 5 | CH_tar_824 | 3 | 3 | 0.000427561 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 5 | CH_tpr_204 | 5 | 6 | 0.0000000685382 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_324 | 4 | 4 | 0.00000347823 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 5 | CH_tpr_70 | 7 | 9 | 0.0000000000042953 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_345 | 5 | CH_tpr_89 | 6 | 6 | 0.00000000003729 |
| Tripterygium wilfordii | NC_052237.1 | 5 | CH_twi_109 | 8 | 34 | 0.000000000584347 |
| Vanilla planifolia | JADCNL010000219.1 | 5 | CH_vpl_226 | 4 | 4 | 0.00000191418 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_63 | 10 | 67 | 0.000000000165943 |
| Vanilla planifolia | CM028150.1 | 5 | CH_vpl_679 | 3 | 3 | 0.000672846 |
| Acer truncatum | chr1 | 6 | CH_acertr_509 | 4 | 9 | 0.0000482831 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_4 | 6 | CH_amhyb_1 | 20 | 54 | 1.74356e-36 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 6 | CH_amhyb_199 | 5 | 24 | 0.0000489581 |
| Aquilegia oxysepala | CHR06 | 6 | CH_aox_279 | 4 | 7 | 0.0000197937 |
| Amborella trichopoda | AmTr_v1.0_scaffold00122 | 6 | CH_atr_331 | 4 | 5 | 0.0000228686 |
| Amborella trichopoda | AmTr_v1.0_scaffold00017 | 6 | CH_atr_4 | 21 | 29 | 9.82875e-42 |
| Camellia sinensis var. sinensis | Chr8 | 6 | CH_camsi_898 | 4 | 11 | 0.0000374455 |
| Cannabis sativa | NC_044374.1 | 6 | CH_cansat_216 | 4 | 4 | 0.000000195634 |
| Capsicum annuum | PGAv.1.6.scaffold587 | 6 | CH_can_132 | 7 | 7 | 0.000000000000907348 |
| Corylus avellana | 4 | 6 | CH_cav_156 | 6 | 9 | 0.000000000921586 |
| Carpinus fangiana | scaffold12 | 6 | CH_cfa_623 | 3 | 4 | 0.000901528 |
| Cardamine hirsuta | Chr1 | 6 | CH_chi_312 | 4 | 4 | 0.000000590185 |
| Cardamine hirsuta | Chr2 | 6 | CH_chi_669 | 4 | 12 | 0.000288271 |
| Davidia involucrata | GWHABJS00000013 | 6 | CH_din_142 | 6 | 7 | 0.0000000000586395 |
| Davidia involucrata | GWHABJS00000005 | 6 | CH_din_175 | 5 | 5 | 0.00000000353316 |
| Davidia involucrata | GWHABJS00000006 | 6 | CH_din_782 | 3 | 3 | 0.000606693 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_162 | 7 | 16 | 0.0000000000905025 |
| Fragaria x ananassa | Fvb2-2 | 6 | CH_fan_165 | 7 | 17 | 0.000000000153609 |
| Glycine max | Gm09 | 6 | CH_gma_851 | 3 | 3 | 0.00053356 |
| Lupinus albus | Lalb_Chr07 | 6 | CH_lal_322 | 4 | 4 | 0.00000556913 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_178 | 7 | 7 | 0.0000000000000271556 |
| Magnolia biondii | Chr18 | 6 | CH_mbi_164 | 6 | 7 | 0.00000000000855833 |
| Olea europaea | chr8 | 6 | CH_oeu_391 | 3 | 3 | 0.000118477 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_181 | 11 | 13 | 2.30396e-21 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_957 | 5 | 5 | 0.0000000210462 |
| Selaginella moellendorffii | scaffold_52 | 6 | CH_smo_167 | 5 | 11 | 0.0000149413 |
| Selaginella moellendorffii | scaffold_77 | 6 | CH_smo_168 | 5 | 11 | 0.0000149413 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_885 | 3 | 4 | 0.000599139 |
| Trochodendron aralioides | group11 | 6 | CH_tar_824 | 3 | 3 | 0.000427561 |
| Trifolium pratense | Tp57577_TGAC_v2_LG6 | 6 | CH_tpr_204 | 5 | 6 | 0.0000000685382 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_324 | 4 | 4 | 0.00000347823 |
| Trifolium pratense | Tp57577_TGAC_v2_LG7 | 6 | CH_tpr_70 | 7 | 9 | 0.0000000000042953 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_345 | 6 | CH_tpr_89 | 6 | 6 | 0.00000000003729 |
| Tripterygium wilfordii | NC_052237.1 | 6 | CH_twi_109 | 8 | 34 | 0.000000000584347 |
| Vanilla planifolia | JADCNL010000219.1 | 6 | CH_vpl_226 | 4 | 4 | 0.00000191418 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_63 | 10 | 67 | 0.000000000165943 |
| Vanilla planifolia | CM028150.1 | 6 | CH_vpl_679 | 3 | 3 | 0.000672846 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |